Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq14 93.3 3e-14 seq7 87.8 1e-12 >seq14 Length=34043612 Score = 93.3 bits (102), Expect = 3e-14 Identities = 155/222 (70%), Gaps = 3/222 (1%) Strand=Plus/Minus Query 18114 AGTACCATGTGAAGTGTTG-ATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATC 18172 || |||| |||||| || | | || || || ||||||||||||| | || || ||| Sbjct 21660188 AGCACCAGGTGAAGGGTGGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATC 21660129 Query 18173 TTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATC 18232 ||||| || ||||| || |||| || | || || || ||| | ||| ||||| || Sbjct 21660128 TTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTC 21660069 Query 18233 GGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCT 18292 ||| ||||||||| | | | ||||||| |||||| || | ||||||| | Sbjct 21660068 CTGGATT--TTGCTTGACATTCTCGATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGT 21660011 Query 18293 TTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTTTAAACT 18334 ||||| |||| || |||||||| || ||||| || | ||| Sbjct 21660010 CTTGCCAGTCAGGGTCTTTACAAAGATCTGCATCTTGACACT 21659969 >seq7 Length=46052510 Score = 87.8 bits (96), Expect = 1e-12 Identities = 163/237 (69%), Gaps = 3/237 (1%) Strand=Plus/Minus Query 18099 CCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCC 18158 || |||| |||| || |||| ||||| || |||||||| || ||||||||||||| Sbjct 22020288 CCGCCCCTGAGTCGGAGCACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAA 22020229 Query 18159 ATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGC 18218 | || | |||||||| || ||||| ||| |||| || | || || || ||| Sbjct 22020228 AGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTGGGGGA 22020169 Query 18219 ACGCCTTCCTTATC--GGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGG 18276 | ||| ||||| || |||| ||| ||| || | ||| ||||| | |||||| Sbjct 22020168 ATGCCCTCCTTGTCCTGGCATCTTG-GCCTTCACATTCTCAATGGTGTCGCTTGGCTCGA 22020110 Query 18277 TTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTTTAAAC 18333 || | ||||||| | ||||| || | || || || || || ||||| ||| ||| Sbjct 22020109 CCTCGAGGGTGATGGTCTTGCCTGTGAGGGTCTTCACGAAGATCTGCATCTTTTAAC 22020053 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379339288903155