Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq10 102 1e-16 >seq10 Length=26897606 Score = 102 bits (112), Expect = 1e-16 Identities = 104/136 (76%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 33604 CCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33663 |||| ||||| || || | || || || | |||||||| ||||| ||||| | ||||| Sbjct 26346948 CCTCATCTCTGCTGATGAGCTCATTGGAGTAGGTGAGTCCCGGCATCAGGCCTCTCTTTT 26346889 Query 33664 TAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33723 | | |||| | |||| ||| ||||| || || ||||||||||| || ||||| ||||||| Sbjct 26346888 TTAACCAATAGATGGCAGCAAATGACCCTGAGAAGAAGATTCCCTCCACTGCTGCAAAGG 26346829 Query 33724 CAATAAGTCTCTCTCC 33739 ||| | | |||||| Sbjct 26346828 CAACTAACCGCTCTCC 26346813 Score = 100 bits (110), Expect = 4e-16 Identities = 81/98 (83%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 34078 CCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCAT 34137 |||| |||||||||||||| ||||| |||| ||||| |||||||| |||||||||||| Sbjct 26344278 CCACCTCTTCCACTGTCCAGAATGAAGCCTGTGCCTGCTTATACATCTTCCAGATGTCAG 26344219 Query 34138 GATATTGGATTGGGAAAATAACAAATCTATTTGGATTT 34175 | || ||||||||||| || ||||| | |||| ||| Sbjct 26344218 GGTACTGGATTGGGAAGATCACAAAGCGCCTTGGGTTT 26344181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629809577698320