Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq10 120 4e-22 seq7 87.8 3e-12 >seq10 Length=26897606 Score = 120 bits (132), Expect = 4e-22 Identities = 108/136 (79%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 49982 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 50041 |||| ||||| || || || || ||||| | |||||||| ||||| ||||| | ||||| Sbjct 26346948 CCTCATCTCTGCTGATGAGCTCATTGGAGTAGGTGAGTCCCGGCATCAGGCCTCTCTTTT 26346889 Query 50042 TAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGCGGCAAAGG 50101 | | |||| | |||| ||||||||||| || ||||||||||| || ||||| ||||||| Sbjct 26346888 TTAACCAATAGATGGCAGCAAATGACCCTGAGAAGAAGATTCCCTCCACTGCTGCAAAGG 26346829 Query 50102 CAACAAGTCTCTCTCC 50117 |||| | | |||||| Sbjct 26346828 CAACTAACCGCTCTCC 26346813 Score = 100 bits (110), Expect = 4e-16 Identities = 90/113 (80%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 50458 ACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGA 50517 || |||||||||||||| ||||| |||| ||||| |||||||| |||||||||||| | Sbjct 26344276 ACCTCTTCCACTGTCCAGAATGAAGCCTGTGCCTGCTTATACATCTTCCAGATGTCAGGG 26344217 Query 50518 TATTGGATTGGGAAAATAACAAATCTATTTGGATTTGGTGCAAGGATCGGTTC 50570 || ||||||||||| || ||||| | |||| ||| | ||| | |||||| Sbjct 26344216 TACTGGATTGGGAAGATCACAAAGCGCCTTGGGTTTTCTCTAAGCAGCGGTTC 26344164 >seq7 Length=46052510 Score = 87.8 bits (96), Expect = 3e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 79669 ATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTG 79728 || ||||| ||||||||||| |||| ||||| || | || || || || ||||| | Sbjct 17698911 ATCTCAGTACAGAGGTTACTGGACTTTATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTA 17698852 Query 79729 TTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATC 79788 || || |||||||||||||| ||| | || || || || ||| |||| || || ||||| Sbjct 17698851 TTGCAGGCATCCTTATAAAGCATGTAAGGGGTTCCGGTCTCAGTCTGGGACTCAATAATG 17698792 Query 79789 GCTTTCCAGAC 79799 || | ||| || Sbjct 17698791 GCGTGCCACAC 17698781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718259651051160