Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq10 89.7 4e-13 seq18 82.4 7e-11 >seq10 Length=26897606 Score = 89.7 bits (98), Expect = 4e-13 Identities = 96/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 13175 TCATCTCTACTTATTAGCTCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTA 13234 |||||||| || || ||||| || || | || || |||||||| || |||| ||||| Sbjct 26346946 TCATCTCTGCTGATGAGCTCATTGGAGTAGGTGAGTCCCGGCATCAGGCCTCTCTTTTTT 26346887 Query 13235 ATCCAAAATATAGCAGCAAACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGCT 13294 | |||| | || |||||||| || || || || || ||||| || ||||||||||| || Sbjct 26346886 AACCAATAGATGGCAGCAAATGACCCTGAGAAGAAGATTCCCTCCACTGCTGCAAAGGCA 26346827 Query 13295 ATCAACC 13301 | |||| Sbjct 26346826 ACTAACC 26346820 >seq18 Length=26030928 Score = 82.4 bits (90), Expect = 7e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 12985 GTCAGCAACAAACTCTATGTACTGTTTCATTAAATCACAGTTCATTCCTATTAATTTTAC 13044 |||||| |||||||| |||||||| ||| | ||||||||||||||| |||| ||||| Sbjct 19431149 GTCAGCCACAAACTCAATGTACTGGGCCATCAGATCACAGTTCATTCCAATTAGCTTTAC 19431208 Query 13045 AGGCATAGCTTCTGT 13059 ||||| ||||| ||| Sbjct 19431209 AGGCAGAGCTTTTGT 19431223 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430977047602638