Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq684 91.5 2e-13 seq246 87.8 2e-12 >seq684 Length=200752 Score = 91.5 bits (100), Expect = 2e-13 Identities = 91/118 (77%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 38241 AACATAGCCGGTTTGATCGGGGGAAATAAAAACATGTAAAAATTTTTCTAATCGAGATGC 38300 |||| | ||||||||||| || ||||| | |||||||| |||||| | ||| | | Sbjct 115255 AACAAACCCGGTTTGATCAGGTGAAATTACTCCATGTAAAGTTTTTTCAAGCCGAAAGGA 115314 Query 38301 TAAGATTTTAGCCAGTATCTTATAATCACAGTTTAAAAGAGAAACTGGTCTATAAGAA 38358 ||| | |||||| |||||||| |||||||| ||||||||||| | || | | ||||| Sbjct 115315 TAATACTTTAGCTAGTATCTTGTAATCACAATTTAAAAGAGATATGGGGCGAAAAGAA 115372 >seq246 Length=267702 Score = 87.8 bits (96), Expect = 2e-12 Identities = 90/118 (76%), Gaps = 0/118 (0%) Strand=Plus/Plus Query 38241 AACATAGCCGGTTTGATCGGGGGAAATAAAAACATGTAAAAATTTTTCTAATCGAGATGC 38300 |||| | ||||||||||| || ||||| | |||||||| |||||| | ||| | Sbjct 235360 AACAAAACCGGTTTGATCAGGTGAAATGACTCCATGTAAAGTTTTTTCAAGCCGAAGGGA 235419 Query 38301 TAAGATTTTAGCCAGTATCTTATAATCACAGTTTAAAAGAGAAACTGGTCTATAAGAA 38358 ||| | |||||| |||||||| |||||||| |||||||| || | || | ||||||| Sbjct 235420 TAATACTTTAGCTAGTATCTTGTAATCACAATTTAAAAGCGATATGGGGCGATAAGAA 235477 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595864410080400