Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq14 105 6e-18 seq7 89.7 5e-13 >seq14 Length=34043612 Score = 105 bits (116), Expect = 6e-18 Identities = 166/233 (71%), Gaps = 6/233 (3%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 ||||| |||| || | ||||| ||| | || || ||||| || | ||| || ||| Sbjct 21660428 CCTCCCCTCAGACGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGG-- 21660371 Query 94841 ATAGTGTTGGA--ATCCT-CCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGA 94897 | || || || ||| | |||||||||| ||| | ||||| | | ||||| ||||| Sbjct 21660370 AGAGGGTGCGACCATCTTTCCAGCTGTTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGG 21660311 Query 94898 GGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCG 94957 || || ||| | ||||| | || || |||||||| ||| |||||| | | || Sbjct 21660310 GGGATGCCTCCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCA 21660251 Query 94958 ACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGCT 95010 || ||| |||||||| || ||||| || || |||||||||||||||||||| Sbjct 21660250 ACCTCAGG-GTGATGGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCATGCT 21660199 Score = 100 bits (110), Expect = 3e-16 Identities = 164/232 (71%), Gaps = 6/232 (3%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTA-TAATCGCT 94839 ||||| |||| || | ||||| ||| | || || ||||| || | ||| || ||| Sbjct 21660883 CCTCCCCTCAGACGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTTGTAGTCGG- 21660825 Query 94840 CATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGA 94897 | || || || ||| |||||||| || ||| | ||||| | | ||||| ||||| Sbjct 21660824 -AGAGGGTGCGACCATCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGG 21660766 Query 94898 GGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCG 94957 || || || || ||||| | || ||||||||||| ||| |||||| | | || Sbjct 21660765 GGGATGCCCTCCTTGTC-TGGATCTTTGCCTTGACATTCTCGATGGTGTCACTGGGCTCA 21660707 Query 94958 ACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 | || | |||||||| || ||||| || || ||||||||||||||||||| Sbjct 21660706 CCCTCCAGGGTGATGGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCATGC 21660655 Score = 96.9 bits (106), Expect = 3e-15 Identities = 164/232 (71%), Gaps = 7/232 (3%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 ||||| |||| || | ||||| ||| | || || ||||| || | ||| || ||| Sbjct 21660655 CCTCCCCTCAGACGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGG-- 21660598 Query 94841 ATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAG 94898 | || || || ||| |||||||| || ||| | ||||| | | ||||| ||||| | Sbjct 21660597 AGAGGGTGCGACCATCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGG 21660538 Query 94899 GAATACCTTCTTTGTCATAAATTTTTGCCTT-GACGGCGCCGACAGTGTCAGCGTGGTCG 94957 || | || || ||||| | || || ||||| ||| ||| |||||| | | || Sbjct 21660537 GA-TGCCCTCCTTGTCCTGGATCTTGGCCTTTGACATTCTCGATGGTGTCACTGGGCTCA 21660479 Query 94958 ACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || ||| |||||||| || ||||| || || ||||||||||||||||||| Sbjct 21660478 ACCTCAGG-GTGATGGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCATGC 21660428 Score = 82.4 bits (90), Expect = 7e-11 Identities = 155/224 (69%), Gaps = 7/224 (3%) Strand=Plus/Minus Query 94787 CTCAATCGCAACACCAAGTGCAAAGTAG-ATTCCTTTTGCACGTTATAATCGCTCATAGT 94845 |||| || | ||||| ||| | || | | ||||| || | ||| || ||| | || Sbjct 21660197 CTCAGACGGAGCACCAGGTGAAGGGTGGGACTCCTTCTGGATGTTGTAGTCGG--AGAGG 21660140 Query 94846 GTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATA 94903 || || ||| |||||||| || ||| | ||||| | | ||||| ||||| || || Sbjct 21660139 GTGCGACCATCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATG 21660080 Query 94904 CCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCA 94963 || || ||||| | ||||| |||||| ||| |||||| | | || || || Sbjct 21660079 CCCTCCTTGTCCTGGATTTTG--CTTGACATTCTCGATGGTGTCACTGGGCTCAACCTCC 21660022 Query 94964 ATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | |||||||| || ||||| || || || |||||||||||||| Sbjct 21660021 AGGGTGATGGTCTTGCCAGTCAGGGTCTTTACAAAGATCTGCAT 21659978 >seq7 Length=46052510 Score = 89.7 bits (98), Expect = 5e-13 Identities = 160/230 (70%), Gaps = 3/230 (1%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || || || | ||| | ||||| ||| | || || || || || | ||| || ||| Sbjct 22020515 CCGCCCCTGAGTCGGAGCACCAGGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAA 22020456 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| | ||| |||||||| || |||| |||||| | | ||||| ||||| || Sbjct 22020455 AGGGTGCGGCCATCTTCCAGCTGCTTGCCGC-AAAGATCAGACGCTGCTGGTCTGGGGGG 22020397 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG-TCGAC 94959 || || || ||||| | || || ||||| || | | ||||| || ||| ||||| Sbjct 22020396 ATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTC-GCTTGGCTCGAC 22020338 Query 94960 GTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGC 95009 || | |||||||| || || || || || ||||| ||||||||||||| Sbjct 22020337 CTCGAGGGTGATGGTCTTGCCTGTGAGGGTCTTCACGAAGATCTGCATGC 22020288 Score = 87.8 bits (96), Expect = 2e-12 Identities = 159/229 (69%), Gaps = 3/229 (1%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || || || | ||| | ||||| || | || ||||| || || | ||| || ||| Sbjct 22020288 CCGCCCCTGAGTCGGAGCACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAA 22020229 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| | ||| |||||||| || ||| ||||||| | | ||||| ||||| ||| Sbjct 22020228 AGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTGGGGGA 22020169 Query 94901 ATACCTTCTTTGTCATAA-ATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG-TCGA 94958 || || || ||||| | || || ||||| || | | ||||| || ||| |||| Sbjct 22020168 ATGCCCTCCTTGTCCTGGCATCTTGGCCTTCACATTCTCAATGGTGTC-GCTTGGCTCGA 22020110 Query 94959 CGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 | || | |||||||| || || || || || ||||| ||||||||||| Sbjct 22020109 CCTCGAGGGTGATGGTCTTGCCTGTGAGGGTCTTCACGAAGATCTGCAT 22020061 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448285489890840