Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq567 143 4e-30 >seq567 Length=118906 Score = 143 bits (158), Expect = 4e-30 Identities = 190/261 (73%), Gaps = 2/261 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||| ||||||| | ||| || |||||||||| |||||||||||||| || ||| Sbjct 107086 GCCAAGCGCCATCGCAAAGTTCTCCGCAATAACATCCAGGGAATCACCAAGCCCGCCATC 107145 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || || |||||| | ||||| || || ||| | ||||||| ||| |||| || |||| Sbjct 107146 CGCCGCCTGGCTTGCCGTGGCGGTGTGAAGTGCATCTCTGGTTTGATCTACGAGGAGACC 107205 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCAC-TATACCGA 16611 || | ||| |||| | || || ||| ||| ||| |||||| |||| || ||| | Sbjct 107206 CGCGGTGTCCTGAAAGTGTTTCTGGAGAACGTGATCTGTGATGC-GGCCACTTACACCAA 107264 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || | |||||||| | ||||||| | || || || ||||||| || || Sbjct 107265 GCACGCCAAGAGAAAGACTGTGTCTGCCATGGACGTGGTTTACGCTCTGAAACGCCAGGG 107324 Query 16672 CCGTAAGATTTATGGTTTTGG 16692 || | | ||||| ||||| Sbjct 107325 ACGCACCTTGTATGGCTTTGG 107345 Score = 80.6 bits (88), Expect = 4e-11 Identities = 86/114 (75%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 16436 AAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGT 16495 ||||| ||||||| | ||| | ||||||||||| |||||||||||||| || || | Sbjct 63513 AAGCGCCATCGCAAAGTTCTCTGCGATAACATCCAGGGAATCACCAAGCCTGCCATTCAC 63572 Query 16496 CGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAG 16549 || |||||| | ||| | || ||||| ||||||| ||| |||| || ||| Sbjct 63573 CGCCTGGCTTGCTGTGACTGTGTGAAGCGCATCTCTGGTTTGATCTAGGAGGAG 63626 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79074268321167