Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq10 111 2e-19 >seq10 Length=26897606 Score = 111 bits (122), Expect = 2e-19 Identities = 106/136 (78%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 33326 CCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 33385 |||| ||||| || || || || ||||| | |||||||| ||||| ||||| | ||||| Sbjct 26346948 CCTCATCTCTGCTGATGAGCTCATTGGAGTAGGTGAGTCCCGGCATCAGGCCTCTCTTTT 26346889 Query 33386 TAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAAGATTCCTTCTACTGCAGCAAAGG 33445 | | |||| | |||| ||| ||||| || || ||||||||||| || ||||| ||||||| Sbjct 26346888 TTAACCAATAGATGGCAGCAAATGACCCTGAGAAGAAGATTCCCTCCACTGCTGCAAAGG 26346829 Query 33446 CAATAAGTCTCTCTCC 33461 ||| | | |||||| Sbjct 26346828 CAACTAACCGCTCTCC 26346813 Score = 93.3 bits (102), Expect = 5e-14 Identities = 78/96 (81%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 33802 ACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTCCAGATGTCATAA 33861 || |||||||||||||| ||||| |||| ||||| |||||||| |||||||||||| Sbjct 26344276 ACCTCTTCCACTGTCCAGAATGAAGCCTGTGCCTGCTTATACATCTTCCAGATGTCAGGG 26344217 Query 33862 TATTGGATTGGGAAAATAACAAATCTATTTGGATTT 33897 || ||||||||||| || ||||| | |||| ||| Sbjct 26344216 TACTGGATTGGGAAGATCACAAAGCGCCTTGGGTTT 26344181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622939265210040