Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq14 98.7 9e-16 >seq14 Length=34043612 Score = 98.7 bits (108), Expect = 9e-16 Identities = 141/198 (71%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 23987 CAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGC 24046 ||| ||||| | |||||||| || | ||||| || | || ||| | || || ||| | Sbjct 21659974 CAAGATGCAGATCTTTGTAAAGACCCTGACTGGCAAGACCATCACCCTGGAGGTTGAGCC 21660033 Query 24047 CAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGA 24106 || |||||||||||| | ||||| |||| || ||||| || ||||| || || || Sbjct 21660034 CAGTGACACCATCGAGAATGTCAAGCAAA--ATCCAGGACAAGGAGGGCATCCCCCCAGA 21660091 Query 24107 TCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA 24166 || ||| | ||||| | || ||||||||| || ||||||| | | | || ||| || Sbjct 21660092 CCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAAGATGGTCGCACCCTCTCCGACTA 21660151 Query 24167 TAACATTCAAAAAGAATC 24184 ||||| || || || || Sbjct 21660152 CAACATCCAGAAGGAGTC 21660169 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || | ||||| || | || ||| | || | ||| ||| Sbjct 21660657 ATGCAGATCTTTGTGAAGACCCTGACTGGTAAGACCATCACCCTGGAGGGTGAGCCCAGT 21660716 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 |||||||||||| | ||||| ||||| | | ||||| || ||||| || || || || Sbjct 21660717 GACACCATCGAGAATGTCAAGGCAAAGA-TCCAGACAAGGAGGGCATCCCCCCAGACCAG 21660775 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTA-TAA 24169 ||| | ||||| | || ||||||||| || ||||||| | | | || ||| || || Sbjct 21660776 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAAGATGGTCGCACCCTCTCCGACTACAAA 21660835 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||| || || || || || |||| | ||| | | |||| ||||| Sbjct 21660836 CATCCAGAAGGAGTCCACCCTTCACCTGGTGCTCCGTCTGAGGGGAGG 21660883 Score = 86.0 bits (94), Expect = 5e-12 Identities = 158/228 (69%), Gaps = 3/228 (1%) Strand=Plus/Plus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 ||||| | ||||| || || | ||||| || | || ||| | || || ||| ||| Sbjct 21660430 ATGCAGATCTTTGTGAAGACCCTGACTGGTAAGACCATCACCCT-GAGGTTGAGCCCAGT 21660488 Query 24051 GACACCATCGAGCAAGTCAAA-CAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 |||||||||||| | |||||| ||||| ||||| || ||||| || || || || Sbjct 21660489 GACACCATCGAGAATGTCAAAGGCCAAGATCCAGGACAAGGAGGGCAT-CCCCCAGACCA 21660547 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||| | ||||| | || ||||||||| || ||||||| | | | || ||| || || Sbjct 21660548 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAAGATGGTCGCACCCTCTCCGACTACAA 21660607 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||| || || || || || |||| | ||| | | |||| ||||| Sbjct 21660608 CATCCAGAAGGAGTCCACCCTTCACCTGGTGCTCCGTCTGAGGGGAGG 21660655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429930660597945