Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq14 116 3e-21 seq7 107 2e-18 >seq14 Length=34043612 Score = 116 bits (128), Expect = 3e-21 Identities = 159/220 (72%), Gaps = 3/220 (1%) Strand=Plus/Minus Query 131016 CAAACGCAGCACTAAATGTATGGTCG-ACTCCTTTTGAATGTTGTAATCGCTCATGGTGC 131074 || ||| ||||| | || | ||| | ||||||| || |||||||| ||| | ||||| Sbjct 21660195 CAGACGGAGCACCAGGTGAAGGGTGGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGC 21660136 Query 131075 GCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTT 131134 | || || ||||||||||| ||| |||| | |||||||||||| || ||||| || | Sbjct 21660135 GACCATCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCT 21660076 Query 131135 CTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGG 131194 | ||||| ||||| ||||||| | ||| | || || ||| ||| | || | || Sbjct 21660075 CCTTGTCCTGGATTT--TGCTTGACATTCTCGATGGTGTCACTGGGCTCAACCTCCAGGG 21660018 Query 131195 TAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 | | ||| || || || || || ||||| || |||||||| Sbjct 21660017 TGATGGTCTTGCCAGTCAGGGTCTTTACAAAGATCTGCAT 21659978 Score = 111 bits (122), Expect = 1e-19 Identities = 166/233 (71%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTT-GTAATCGC 131065 ||| || | || ||| ||||| | || | ||| |||||||| || ||||| ||| ||| Sbjct 21660884 GCCTCCCCTCAGACGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTTGTAGTCGG 21660825 Query 131066 TCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAG 131125 | |||||| || || ||||||||||| ||| |||| | |||||||||||| || | Sbjct 21660824 AGAGGGTGCGACCATCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGG 21660765 Query 131126 GGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185 |||| || || ||||| | ||| || ||||| | ||| | || || ||| ||| Sbjct 21660764 GGATGCCCTCCTTGTCTG-GATCTTTGCCTTGACATTCTCGATGGTGTCACTGGGCTCAC 21660706 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238 || | ||| | ||| ||||| || || || || || || ||||||||| || Sbjct 21660705 CCTCCAGGGTGATGGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCATGCCT 21660653 Score = 107 bits (118), Expect = 2e-18 Identities = 166/233 (71%), Gaps = 3/233 (1%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || | || ||| ||||| | || | ||| |||||||| || |||||||| ||| Sbjct 21660656 GCCTCCCCTCAGACGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 21660597 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 | |||||| || || ||||||||||| ||| |||| | |||||||||||| || || Sbjct 21660596 GAGGGTGCGACCATCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGG-GG 21660538 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGC-TTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185 ||| || || ||||| ||| || | |||| | ||| | || || ||| ||| | Sbjct 21660537 GATGCCCTCCTTGTCCTGGATCTTGGCCTTTGACATTCTCGATGGTGTCACTGGGCTCAA 21660478 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGACT 131238 || | ||| | ||| ||||| || || || || || || ||||||||| || Sbjct 21660477 CCTC-AGGGTGATGGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCATGCCT 21660426 Score = 105 bits (116), Expect = 6e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||| || | || ||| ||||| | || | ||| |||||||| || |||||||| ||| Sbjct 21660429 GCCTCCCCTCAGACGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGA 21660370 Query 131067 CATGGTGCGCGAGTCCT-CTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAG 131125 | |||||| || | | ||||| ||||| ||| |||| | |||||||||||| || | Sbjct 21660369 GAGGGTGCGACCATCTTTCCAGCTGTTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGG 21660310 Query 131126 GGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGA 131185 |||| ||| | ||||| ||| || ||||| | ||| | || || ||| ||| | Sbjct 21660309 GGATGCCTCCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCAA 21660250 Query 131186 TGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || | ||| | ||| ||||| || || || || || || ||||||||| Sbjct 21660249 CCTC-AGGGTGATGGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCATG 21660201 >seq7 Length=46052510 Score = 107 bits (118), Expect = 2e-18 Identities = 154/216 (71%), Gaps = 1/216 (0%) Strand=Plus/Minus Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079 || ||||| | || | ||| ||||| || || |||||||| ||| | |||||| Sbjct 22020503 CGGAGCACCAGGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCA 22020444 Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139 || || ||||||||||| || |||| | |||||||||||| || ||||| || || ||| Sbjct 22020443 TCTTCCAGCTGCTTGCC-GCAAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTG 22020385 Query 131140 TCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACG 131199 || ||| || ||| | | ||| | || ||| | | ||||| |||| ||| | | Sbjct 22020384 TCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCTCGACCTCGAGGGTGATG 22020325 Query 131200 GTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 || || || || || || || ||||| ||||||||| Sbjct 22020324 GTCTTGCCTGTGAGGGTCTTCACGAAGATCTGCATG 22020289 Score = 98.7 bits (108), Expect = 9e-16 Identities = 152/216 (70%), Gaps = 1/216 (0%) Strand=Plus/Minus Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079 || ||||| | ||| | ||| || || || || |||||||| ||| | |||||| Sbjct 22020276 CGGAGCACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCA 22020217 Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTG 131139 || || ||||||||||| || |||| | |||||||||||| || || || || || ||| Sbjct 22020216 TCTTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTG 22020157 Query 131140 T-CGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAAC 131198 | | | || || ||| | | ||| | || ||| | | ||||| |||| ||| | Sbjct 22020156 TCCTGGCATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCTCGACCTCGAGGGTGAT 22020097 Query 131199 GGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 ||| || || || || || || ||||| |||||||| Sbjct 22020096 GGTCTTGCCTGTGAGGGTCTTCACGAAGATCTGCAT 22020061 Score = 96.9 bits (106), Expect = 3e-15 Identities = 153/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079 || ||||| | ||| | ||| || || || || |||||||| ||| |||||| Sbjct 22020731 CGGAGCACCAGATG-AGGGTGGATTCTTTCTGGATGTTGTAGTCGGAAGAGGTGCGGCCA 22020673 Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCT-GGTCCGGAGGGATTCCTTCTTT 131138 || || ||||||||||| || |||| | |||||||| |||| || ||||| || || || Sbjct 22020672 TCTTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGGTCTGGGGGGATGCCCTCCTT 22020613 Query 131139 GTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAAC 131198 ||| ||| || ||| | | ||| | || ||| | | ||||| |||| ||| | Sbjct 22020612 GTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCTCGACCTCGAGGGTGAT 22020553 Query 131199 GGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 ||| || || || || || || ||||| ||||||||| Sbjct 22020552 GGTCTTGCCTGTGAGGGTCTTCACGAAGATCTGCATG 22020516 Score = 96.9 bits (106), Expect = 3e-15 Identities = 153/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 131020 CGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAG 131079 || ||||| | ||| | ||| || || || || |||||||| ||| | |||||| Sbjct 22020959 CGGAGCACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCA 22020900 Query 131080 TCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTG-GTCCGGAGGGATTCCTTCTTT 131138 || || ||||||||||| || |||| | ||||||||| ||| || ||||| || || || Sbjct 22020899 TCTTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGCGTCTGGGGGGATGCCCTCCTT 22020840 Query 131139 GTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAAC 131198 ||| ||| || ||| | | ||| | || ||| | | ||||| |||| ||| | Sbjct 22020839 GTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCTCGACCTCGAGGGTGAT 22020780 Query 131199 GGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 ||| || || || || | | | ||||| ||||||||| Sbjct 22020779 GGTCTTGCCTGTGAG-GGTCTCACGAAGATCTGCATG 22020744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472006787736960