Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq14 96.9 3e-15 seq7 96.9 3e-15 >seq14 Length=34043612 Score = 96.9 bits (106), Expect = 3e-15 Identities = 153/217 (71%), Gaps = 3/217 (1%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGG-ACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTC 16782 || |||| || || |||| ||||||| || ||||||||||||| | ||| | || Sbjct 21660188 AGCACCAGGTGAAGGGTGGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATC 21660129 Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842 |||| || ||||| || | || || ||||| ||||| || | |||||| ||||| Sbjct 21660128 TTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTC 21660069 Query 16843 GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGT 16902 |||| ||||| || | | | ||||| | |||||| |||| ||||||||| Sbjct 21660068 CTGGATTT--TGCTTGACATTCTCGATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGT 21660011 Query 16903 TTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTG 16939 || || ||||| || || ||||| |||||||| ||| Sbjct 21660010 CTTGCCAGTCAGGGTCTTTACAAAGATCTGCATCTTG 21659974 Score = 93.3 bits (102), Expect = 3e-14 Identities = 151/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATG-TTGTAGTCGGCCATGGTTTTGGCGTC 16782 || |||| || || ||||||||||| || ||| |||||||||| | ||| | || Sbjct 21660868 AGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTTGTAGTCGGAGAGGGTGCGACCATC 21660809 Query 16783 CTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC 16842 |||| || ||||| || | || || ||||| ||||| || | |||||| ||||| Sbjct 21660808 TTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTC 21660749 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || ||||| ||| || | | | ||||| | |||||| |||| |||||||| Sbjct 21660748 TGGATCTTTGC--CTTGACATTCTCGATGGTGTCACTGGGCTCACCCTCCAGGGTGATGG 21660691 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | || || ||||| || || ||||| |||||||| Sbjct 21660690 TCTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 21660657 >seq7 Length=46052510 Score = 96.9 bits (106), Expect = 3e-15 Identities = 157/224 (70%), Gaps = 3/224 (1%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| ||| || ||||| || || || ||||||||||||| | ||| | | || Sbjct 22020273 AGCACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCT 22020214 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 |||| || ||||| ||| | || || ||||| ||||| || | |||||| ||||| Sbjct 22020213 TCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCC 22020154 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 |||| ||| |||||| | | | ||||||| ||||| || | |||||||| Sbjct 22020153 TGGCATCTTG-GCCTTCACATTCTCAATGGTGTCGCTTGGCTCGACCTCGAGGGTGATGG 22020095 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTTTGTAGCCT 16945 | || || || || || || || || |||||||| || || ||| Sbjct 22020094 TCTTGCCTGTGAGGGTCTTCACGAAGATCTGCATCTTTTAACCT 22020051 Score = 84.2 bits (92), Expect = 2e-11 Identities = 149/214 (70%), Gaps = 5/214 (2%) Strand=Plus/Minus Query 16724 AGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCC 16783 || |||| || || |||||||| || || ||||||||||||| | ||| | | || Sbjct 22020500 AGCACCAGGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCT 22020441 Query 16784 TCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC- 16842 |||| || ||| ||||| | || || ||||| ||||| || | |||||| ||||| Sbjct 22020440 TCCAGCTGCTTG-CCGCAAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCC 22020382 Query 16843 -GGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGG 16901 || || || |||||| | | | ||||||| ||||| || | |||||||| Sbjct 22020381 TGGATCTTGGC--CTTCACATTCTCAATGGTGTCGCTTGGCTCGACCTCGAGGGTGATGG 22020324 Query 16902 TTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 | || || || || || || || || |||||||| Sbjct 22020323 TCTTGCCTGTGAGGGTCTTCACGAAGATCTGCAT 22020290 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405082969186810