Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq10 95.1 2e-14 seq7 84.2 3e-11 >seq10 Length=26897606 Score = 95.1 bits (104), Expect = 2e-14 Identities = 90/115 (78%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 33157 CCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCAT 33216 |||| |||||||||||||| ||||| |||| ||||| |||||||| |||||||||||| Sbjct 26344278 CCACCTCTTCCACTGTCCAGAATGAAGCCTGTGCCTGCTTATACATCTTCCAGATGTCAG 26344219 Query 33217 GATATTGAATTGGAAAAATAACAAATCTATTTGGATTTTTTGCAAGGATTGGTTC 33271 | || || ||||| || || ||||| | |||| |||| | ||| | ||||| Sbjct 26344218 GGTACTGGATTGGGAAGATCACAAAGCGCCTTGGGTTTTCTCTAAGCAGCGGTTC 26344164 >seq7 Length=46052510 Score = 84.2 bits (92), Expect = 3e-11 Identities = 97/131 (74%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 62801 ATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTG 62860 |||||||| || || ||||| |||| ||||| || | || || || || ||||| | Sbjct 17698911 ATCTCAGTACAGAGGTTACTGGACTTTATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTA 17698852 Query 62861 TTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATC 62920 || || |||||||||||||| ||| | || || || || ||| |||| || || ||||| Sbjct 17698851 TTGCAGGCATCCTTATAAAGCATGTAAGGGGTTCCGGTCTCAGTCTGGGACTCAATAATG 17698792 Query 62921 GCTTTCCAGAC 62931 || | ||| || Sbjct 17698791 GCGTGCCACAC 17698781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633623929112400