Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq14 98.7 9e-16 seq7 96.9 3e-15 >seq14 Length=34043612 Score = 98.7 bits (108), Expect = 9e-16 Identities = 151/213 (71%), Gaps = 3/213 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||||||||| |||| || || ||||||| | || || ||| | | Sbjct 21659978 ATGCAGATCTTTGTAAAGACCCTGACTGGCAAGACCATCACCCTGGAGGTTGAGCCCAGT 21660037 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| |||||| | |||| |||||| ||||| || || || || || ||||| Sbjct 21660038 GACACCATCGAGAATGTCAAGC--AAAATCCAGGACAAGGAGGGCATCCCCCCAGACCAG 21660095 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178 ||||| | || || |||||||| || | ||||||| |||||| | ||| ||||| Sbjct 21660096 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAAGATGGTCGCACCCTCTCCGACTACAAC 21660155 Query 25179 ATTCAAAAAGAAT-CCACGCTACATTTAGTGCT 25210 || || || || | |||| || || | ||||| Sbjct 21660156 ATCCAGAAGGAGTCCCACCCTTCACCTGGTGCT 21660188 Score = 98.7 bits (108), Expect = 9e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| |||| ||||| ||||||| | || || ||| | | Sbjct 21660202 ATGCAGATCTTTGTGAAGACCCTGACTGGTAAGACCATCACCCT-GAGGTTGAGCCCAGT 21660260 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| |||||| | ||| || ||| ||||| | ||| || || || ||||| Sbjct 21660261 GACACCATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGGAGGCATCCCCCCAGACCAG 21660320 Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAG-AAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | || || ||||||||||| | | |||||| |||||| | ||| ||||| Sbjct 21660321 CAGCGTCTGATCTTCGCCGGCAAACAGCTGGAAAGATGGTCGCACCCTCTCCGACTACAA 21660380 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 || || || || ||||| || || | ||||| | || || ||||| Sbjct 21660381 CATCCAGAAGGAGTCCACCCTTCACCTGGTGCTCCGTCTGAGGGGAGG 21660428 >seq7 Length=46052510 Score = 96.9 bits (106), Expect = 3e-15 Identities = 150/213 (70%), Gaps = 1/213 (0%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | || || || ||||||| |||| || ||| | Sbjct 22020061 ATGCAGATCTTCGTGAAGACCCTCACAGGCAAGACCATCACCCTCGAGGTCGAGCCAAGC 22020120 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTG-ACAAAGAAGGGATTCCACCTGACCA 25117 ||||| || ||| ||||| || || | | |||| || || ||||| || ||||| Sbjct 22020121 GACACCATTGAGAATGTGAAGGCCAAGATGCCAGGACAAGGAGGGCATTCCCCCAGACCA 22020180 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | || ||||||||||| || | ||||||| ||||| | ||| ||||| Sbjct 22020181 GCAGCGTCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTTTCCGACTACAA 22020240 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || ||||||||||| || ||| | ||||| Sbjct 22020241 CATCCAGAAAGAATCCACCCTTCATCTGGTGCT 22020273 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || ||||| | || || || ||||||| |||| || ||| | Sbjct 22020517 ATGCAGATCTTCGTGAAGACCCTCACAGGCAAGACCATCACCCTCGAGGTCGAGCCAAGC 22020576 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118 ||||| || ||| ||||| || ||| ||||| || || || || || |||| | Sbjct 22020577 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCCA 22020636 Query 25119 -CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | || ||||||||||| || | ||||||| ||||| ||| ||||| Sbjct 22020637 GCAGCGTCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCTCTTCCGACTACAA 22020696 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || ||||||||||| || ||| | ||||| Sbjct 22020697 CATCCAGAAAGAATCCACCCT-CATCTGGTGCT 22020728 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || || || | ||| | || || || ||||||| |||| || ||| | Sbjct 22020745 ATGCAGATCTTCGTGA-GACCCTCACAGGCAAGACCATCACCCTCGAGGTCGAGCCAAGC 22020803 Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC-CA 25117 ||||| || ||| ||||| || ||| ||||| || || || || || ||| || Sbjct 22020804 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACGCA 22020863 Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177 ||||| | || ||||||||||| || | ||||||| ||||| | ||| ||||| Sbjct 22020864 GCAGCGTCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTTTCCGACTACAA 22020923 Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCT 25210 || || ||||||||||| || ||| | ||||| Sbjct 22020924 CATCCAGAAAGAATCCACCCTTCATCTGGTGCT 22020956 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433322618472485