Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq24 93.3 9e-14 seq3 93.3 9e-14 seq426 91.5 3e-13 seq25 91.5 3e-13 seq18 91.5 3e-13 seq10 91.5 3e-13 seq5 91.5 3e-13 seq22 89.7 1e-12 seq7 84.2 4e-11 >seq24 Length=22381654 Score = 93.3 bits (102), Expect = 9e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 142502 TAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGA 142561 |||||||| |||||||||||||||||| ||||||||||||| |||||||||||||| Sbjct 7423217 TAGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGA 7423158 Query 142562 GCCCCACATCGGGC 142575 ||||||| | |||| Sbjct 7423157 GCCCCACGTTGGGC 7423144 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 7421520 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 7421579 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 7421580 CCCACGTTGGGC 7421591 Score = 87.8 bits (96), Expect = 4e-12 Identities = 67/77 (87%), Gaps = 2/77 (3%) Strand=Plus/Plus Query 142048 CGCATGTCTCTGTGGCGCAATGGAC-AGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGT 142106 |||| ||||||||||||||||||| |||||| ||||||||||||||| ||| | ||||| Sbjct 10315565 CGCA-GTCTCTGTGGCGCAATGGAATAGCGCGCTGGACTTCTAATCCAGAGGCTCCGGGT 10315623 Query 142107 TCGACCCCCGCCAGAGA 142123 |||| |||| |||||| Sbjct 10315624 TCGAGTCCCGGCAGAGA 10315640 >seq3 Length=29826154 Score = 93.3 bits (102), Expect = 9e-14 Identities = 73/86 (85%), Gaps = 1/86 (1%) Strand=Plus/Plus Query 142496 GTGAGATAGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGG 142555 |||| || |||||| |||||||||||||||||| ||||||||||||| |||||||| Sbjct 7625681 GTGACAT-GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGG 7625739 Query 142556 GTTCGAGCCCCACATCGGGCAGAAGT 142581 ||||||||||||| | |||| |||| Sbjct 7625740 GTTCGAGCCCCACGTTGGGCGCAAGT 7625765 Score = 91.5 bits (100), Expect = 3e-13 Identities = 67/78 (86%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 7625878 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 7625937 Query 142564 CCCACATCGGGCAGAAGT 142581 ||||| | |||| |||| Sbjct 7625938 CCCACGTTGGGCGCAAGT 7625955 Score = 86.0 bits (94), Expect = 1e-11 Identities = 63/72 (88%), Gaps = 1/72 (1%) Strand=Plus/Minus Query 142053 GTCTCTGTGGCGCAATGGAC-AGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGAC 142111 ||||||||||||||||||| |||||| ||||||||||||||| ||| | ||||||||| Sbjct 11687254 GTCTCTGTGGCGCAATGGAATAGCGCGCTGGACTTCTAATCCAGAGGCTCCGGGTTCGAG 11687195 Query 142112 CCCCGCCAGAGA 142123 |||| |||||| Sbjct 11687194 TCCCGGCAGAGA 11687183 >seq426 Length=5017 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 3512 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 3453 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 3452 CCCCACGTTGGGC 3440 >seq25 Length=19657286 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 8898850 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 8898909 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 8898910 CCCCACGTTGGGC 8898922 >seq18 Length=26030928 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 20698648 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 20698589 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 20698588 CCCCACGTTGGGC 20698576 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 20696754 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 20696695 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 20696694 CCCACGTTGGGC 20696683 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 20699297 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 20699238 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 20699237 CCCACGTTGGGC 20699226 >seq10 Length=26897606 Score = 91.5 bits (100), Expect = 3e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 142503 AGCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAG 142562 ||||||| |||||||||||||||||| ||||||||||||| ||||||||||||||| Sbjct 1581756 AGCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAG 1581697 Query 142563 CCCCACATCGGGC 142575 |||||| | |||| Sbjct 1581696 CCCCACGTTGGGC 1581684 >seq5 Length=33107657 Score = 91.5 bits (100), Expect = 3e-13 Identities = 98/130 (75%), Gaps = 0/130 (0%) Strand=Plus/Minus Query 217836 CTGCACTCTCATCCTGACAGAGGGAGACTCAGCTGCCACGCTGGCAACCGCTGGTCTTGC 217895 ||||||||| |||||||| || |||||||| || |||||||| ||||||| | Sbjct 23748211 CTGCACTCTGATCCTGACGGAAGGAGACTCGGCCAAGACGCTGGCCGTGTCTGGTCTGGG 23748152 Query 217896 CGTGGTGGGTCGTGAAAGGTATGGTATCTTCCCCCTCCGTGGTAAGCTGCTCAACGTGCG 217955 ||||||||| | || | || || |||| |||||| | || || ||||||||||||| Sbjct 23748151 CGTGGTGGGCAGGGACCGCTACGGAGTCTTTCCCCTCAGGGGCAAAATGCTCAACGTGCG 23748092 Query 217956 CGATGCCTCG 217965 || |||||| Sbjct 23748091 GGAGGCCTCG 23748082 >seq22 Length=20609816 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||||| |||||||||||||||| Sbjct 10497822 GCCCGGCTAGCTCAGTCGGTAGAGCATGAGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 10497881 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 10497882 CCCACGTTGGGC 10497893 >seq7 Length=46052510 Score = 84.2 bits (92), Expect = 4e-11 Identities = 155/227 (68%), Gaps = 8/227 (4%) Strand=Plus/Minus Query 293539 CCCTTGCTGGCAGGAGACCCCTCAAAGGTGGGATGGGGGCCATGCTCATCAGAGAGCTCG 293598 || |||||| |||| ||||| || |||| || |||||||||||| ||| ||||| Sbjct 17699739 CCTTTGCTGACAGGGGACCCTGCATAGGTCTCATATGGGCCATGCTCAGCAGCCAGCTCA 17699680 Query 293599 CAAGATGCCTCAACAGCAGCAAAGTAAATGTGCTCGAAGATCTCACGGTTGAGCTTGCGA 293658 || | ||||| |||||| |||| || ||| ||||||| | ||||||||| | Sbjct 17699679 CAGCTGGACTCAAGGGCAGCATAGTAGATAGTCTCAAAGATCTGAGTGTTGAGCTTCTGG 17699620 Query 293659 GCCT----GCTCAGAGTCAAACGGCATCTTCAGCTGGAAGAACACATCCTGCAGACCCTG 293714 |||| |||| |||||||| | || | ||| || |||| ||||||||| Sbjct 17699619 GCCTCTGCGCTC----TCAAACGGAAAACGCATCAGGATAAAGGCATCGGCCAGACCCTG 17699564 Query 293715 TACACCTACACCAACGGGGCGACGACGCTTGTTGCTCGTCTCTGCCT 293761 ||||| | || | ||| | | ||||||||| |||| |||| Sbjct 17699563 GACACCAATGCCGATGGGCCTGTGGCGCTTGTTGGAGTTCTCAGCCT 17699517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027823380626979