Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq14 161 2e-34 seq7 158 2e-33 seq18 89.7 9e-13 seq8 84.2 4e-11 >seq14 Length=34043612 Score = 161 bits (178), Expect = 2e-34 Identities = 174/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTA-TAATCGGA 68293 ||||| | || || | |||| ||| || |||||||| || |||||||| || ||||| Sbjct 21660883 CCTCCCCTCAGACGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTTGTAGTCGGA 21660824 Query 68294 GAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGG 68353 ||| || | |||||||| | |||||| |||||||| || || | || ||||| || || Sbjct 21660823 GAGGGTGCGACCATCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGG 21660764 Query 68354 AATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTAC 68413 ||||| ||||||||| || ||||||||||||| |||||||||||| | || | Sbjct 21660763 GATGCCCTCCTTGTCTGGA-TCTTTGCCTTGACATTCTCGATGGTGTCACTGGGCTCACC 21660705 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||| ||||||||| || || || |||||||| || || |||||||| Sbjct 21660704 CTCCAGGGTGATGGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 21660657 Score = 152 bits (168), Expect = 9e-32 Identities = 162/210 (77%), Gaps = 3/210 (1%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGG-ACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTC 68311 |||| ||| || |||| |||| || |||||||| || |||||||| || | |||||||| Sbjct 21660185 ACCAGGTGAAGGGTGGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCTTC 21660126 Query 68312 TAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTG 68371 | |||||| |||||||| || || | || ||||| || || ||||| |||||||| || Sbjct 21660125 CAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTG 21660066 Query 68372 AATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTT 68431 || ||||| ||||| |||||||||||| | || || |||| ||||||||| || Sbjct 21660065 GAT-TTTGC-TTGACATTCTCGATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTT 21660008 Query 68432 TCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || |||||||| || || |||||||| Sbjct 21660007 GCCAGTCAGGGTCTTTACAAAGATCTGCAT 21659978 Score = 152 bits (168), Expect = 9e-32 Identities = 172/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| | || || | |||| ||| || |||||||| || |||||||| || |||||| Sbjct 21660428 CCTCCCCTCAGACGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 21660369 Query 68295 AGTGTCCTCCCATCTT-CTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGG 68353 || || | ||||||| | | ||| || |||||||| || || | || ||||| || || Sbjct 21660368 AGGGTGCGACCATCTTTCCAGCTGTTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGG 21660309 Query 68354 AATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTAC 68413 |||||| ||||||| || ||||| |||||||| |||||||||||| | || || Sbjct 21660308 GATGCCTCCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCAAC 21660249 Query 68414 TTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || ||||||||| || || || |||||||| || || |||||||| Sbjct 21660248 CT-CAGGGTGATGGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 21660202 >seq7 Length=46052510 Score = 158 bits (174), Expect = 2e-33 Identities = 161/209 (77%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||| ||| || ||||||||||| |||||||| || ||||| || || | |||||||| Sbjct 22020497 ACCAGGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCTTCC 22020438 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | |||||| ||| | || || || | || ||||| || || ||||| |||||||| || Sbjct 22020437 AGCTGCTTGCCG-CAAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGG 22020379 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| ||||| || ||| |||||||| || || || || | ||||||||| || Sbjct 22020378 ATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCTCGACCTCGAGGGTGATGGTCTTG 22020319 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || ||||||||||| ||||| |||||||| Sbjct 22020318 CCTGTGAGGGTCTTCACGAAGATCTGCAT 22020290 Score = 154 bits (170), Expect = 3e-32 Identities = 161/210 (77%), Gaps = 1/210 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 |||| || || ||||| ||||| |||||||| || ||||| || || | |||||||| Sbjct 22020270 ACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCTTCC 22020211 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | |||||| ||||| || || || | || ||||| || |||||||| |||||||| || Sbjct 22020210 AGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGG 22020151 Query 68373 -ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTT 68431 ||||| ||||| || ||| |||||||| || || || || | ||||||||| || Sbjct 22020150 CATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCTCGACCTCGAGGGTGATGGTCTT 22020091 Query 68432 TCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || ||||||||||| ||||| |||||||| Sbjct 22020090 GCCTGTGAGGGTCTTCACGAAGATCTGCAT 22020061 Score = 141 bits (156), Expect = 2e-28 Identities = 155/202 (77%), Gaps = 3/202 (1%) Strand=Plus/Minus Query 68262 AGCGTGGACTCTTTTTGGATGTTATAATCGGA-GAGTGTCCTCCCATCTTCTAACTGCTT 68320 || ||||| ||||| |||||||| || ||||| ||| || | |||||||| | |||||| Sbjct 22020717 AGGGTGGATTCTTTCTGGATGTTGTAGTCGGAAGAG-GTGCGGCCATCTTCCAGCTGCTT 22020659 Query 68321 CCCGGCGAATATGAGTCTTTGTTGG-TCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTG 68379 ||||| || || || | || ||| || || || ||||| |||||||| || ||||| | Sbjct 22020658 GCCGGCAAAGATCAGACGCTGCTGGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGG 22020599 Query 68380 CCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGA 68439 |||| || ||| |||||||| || || || || | ||||||||| || || |||| Sbjct 22020598 CCTTCACATTCTCAATGGTGTCGCTTGGCTCGACCTCGAGGGTGATGGTCTTGCCTGTGA 22020539 Query 68440 GGGTCTTGACGAATATCTGCAT 68461 ||||||| ||||| |||||||| Sbjct 22020538 GGGTCTTCACGAAGATCTGCAT 22020517 Score = 127 bits (140), Expect = 4e-24 Identities = 158/211 (75%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTC-CCATCTTC 68311 |||| || || ||||| ||||| |||||||| || ||||| || || | |||||||| Sbjct 22021181 ACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGGGCCATCTTC 22021122 Query 68312 TAACTGCTTCCCGGCGAAT-ATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTT 68370 | |||||| ||||| || || || | || || ||| |||||||| |||||||| | Sbjct 22021121 -AGCTGCTTGCCGGCCAAAGATCAGACGCTGCTGTCTGGGGGGAATGCCCTCCTTGTCCT 22021063 Query 68371 GAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTT 68430 | ||||| ||||| || ||| |||||||| || || || || | ||||||||| | Sbjct 22021062 GGATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCTCGACCTCGAGGGTGATGGTCT 22021003 Query 68431 TTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || ||||||||||| ||||| |||||||| Sbjct 22021002 G-CCTGTGAGGGTCTTCACGAAGATCTGCAT 22020973 >seq18 Length=26030928 Score = 89.7 bits (98), Expect = 9e-13 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Plus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 |||||| ||| ||||||||||| ||| | |||||||||||||| ||||||||| Sbjct 19430521 CATGACACCCATTCTCTGGTACTCCCCTACTCTCTTCTCGAAGAAGTTGGTCTTGCCCTC 19430580 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGC 10033 || || ||| |||||||||||||||||| ||||| || Sbjct 19430581 CAGCGAGATGTTCTCCATGAAGTCAAAGGGATTCTCCGC 19430619 >seq8 Length=32939842 Score = 84.2 bits (92), Expect = 4e-11 Identities = 83/105 (79%), Gaps = 2/105 (2%) Strand=Plus/Minus Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGAT-TCTACTTC 68416 |||||||| || || ||||| |||||||| |||||||| || |||| ||||| || Sbjct 3064556 CCTTCCTTATCCTGGATCTTAGCCTTGACATTTTCGATGGTATC-GCTGGGCTCTACCTC 3064498 Query 68417 CAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | |||||||||||| ||||| | ||||| ||||| |||||||| Sbjct 3064497 AAGGGTGATGGTTTTCCCCGTCAACGTCTTTACGAAGATCTGCAT 3064453 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921610660834680