Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq297 89.7 4e-13 seq7 84.2 2e-11 seq14 82.4 6e-11 >seq297 Length=31496 Score = 89.7 bits (98), Expect = 4e-13 Identities = 73/85 (86%), Gaps = 3/85 (4%) Strand=Plus/Plus Query 114334 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAA-GATCTAAGGAAC 114390 |||||||| |||||||||||||||| |||||||||||||| | | |||| ||||||| Sbjct 15430 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACGTTGGAGCGATCAAAGGAAC 15489 Query 114391 CAAAACTGATATATTGAGCCATTCG 114415 || ||||||| || ||||||||||| Sbjct 15490 CATAACTGATTTAATGAGCCATTCG 15514 Score = 89.7 bits (98), Expect = 4e-13 Identities = 73/85 (86%), Gaps = 3/85 (4%) Strand=Plus/Plus Query 115531 CATGTATT-GCTCTAGAATTACCAC-GTTATCCAAGTAACTGAGTAA-GATCTAAGGAAC 115587 |||||||| |||||||||||||||| |||||||||||||| | | |||| ||||||| Sbjct 15430 CATGTATTAGCTCTAGAATTACCACAGTTATCCAAGTAACGTTGGAGCGATCAAAGGAAC 15489 Query 115588 CAAAACTGATATATTGAGCCATTCG 115612 || ||||||| || ||||||||||| Sbjct 15490 CATAACTGATTTAATGAGCCATTCG 15514 >seq7 Length=46052510 Score = 84.2 bits (92), Expect = 2e-11 Identities = 167/244 (68%), Gaps = 20/244 (8%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 || || || || || |||||||||||||| ||| || ||||| |||||||| || | Sbjct 22020288 CCGCCCCTGAGTCGGAGCACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGA- 22020230 Query 33961 AATTGT-CGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 || || || | || |||| |||||||||||||| ||||| |||||||| || || Sbjct 22020229 AAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTGGGGG 22020170 Query 34020 CACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCA 34079 | || ||| |||||| | || | ||| ||||| | ||| | | |||| Sbjct 22020169 AATGCCCTCCTTGTCC--------TGGCATCTTGGCCTTCACATTCTCAATGGTGTCGCT 22020118 Query 34080 T---TCGACC------GTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCAT-TT 34129 | |||||| || || || || || || || || ||||| ||||| ||||| || Sbjct 22020117 TGGCTCGACCTCGAGGGTGATGGTCTTGCCTGTGAGGGTCTTCACGAAGATCTGCATCTT 22020058 Query 34130 TTAA 34133 |||| Sbjct 22020057 TTAA 22020054 >seq14 Length=34043612 Score = 82.4 bits (90), Expect = 6e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 33901 CCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGCC 33960 ||||| ||||| || |||||||| ||||| ||| ||||||||| |||||||| || | Sbjct 21660655 CCTCCCCTCAGACGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 21660596 Query 33961 AATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATC 34013 | || | || |||| ||||||||||| || ||||| |||||||| || Sbjct 21660595 AGGGTGCGACCATCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTC 21660543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397057468857238