Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq18 102 1e-16 seq7 86.0 7e-12 >seq18 Length=26030928 Score = 102 bits (112), Expect = 1e-16 Identities = 103/134 (77%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 126066 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTCT 126125 ||||||| | | ||||| ||||| |||||| ||| || |||||||| |||||||||| Sbjct 19431668 CCTCGTCTCTGCTAATGAGCTCATTGGAGAAGGTCAGGCCAGGCATGAGCCCCCGCTTCT 19431727 Query 126126 TCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAACG 126185 ||| ||||||||| ||| ||| || || |||||||| || ||||| ||| || || | Sbjct 19431728 TCAGCCAGAAAATGGCAGCAAAGGATCCAGAGAAGAAAATCCCCTCAACAGCAGCAAAAG 19431787 Query 126186 CAAAGAGACGCTCA 126199 | | | ||||||| Sbjct 19431788 CGACAACACGCTCA 19431801 >seq7 Length=46052510 Score = 86.0 bits (94), Expect = 7e-12 Identities = 107/145 (74%), Gaps = 4/145 (3%) Strand=Plus/Minus Query 114512 GTGTACTCTATAATTTCCGTACACAAATT--TGAACTCTTAATGGTGCCCAAGTTCTTTT 114569 |||||||||| ||| || ||||| | || || ||| | |||||||||| ||||| | Sbjct 17698923 GTGTACTCTACAATCTCAGTACAGAGGTTACTGGACTTT--ATGGTGCCCAGGTTCTGCT 17698866 Query 114570 GATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTT 114629 | || ||| | || || |||||||| ||||||||||| || || || ||||| || | Sbjct 17698865 GGTTGCTCTTCCTATTGCAGGCATCCTTATAAAGCATGTAAGGGGTTCCGGTCTCAGTCT 17698806 Query 114630 GGGACTTGAGAATAGCCTTCCAGAC 114654 |||||| | ||| || | ||| || Sbjct 17698805 GGGACTCAATAATGGCGTGCCACAC 17698781 Score = 82.4 bits (90), Expect = 9e-11 Identities = 74/93 (80%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 113941 ATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGA 114000 |||||| ||| | || || ||||||| | | || || || |||||||| ||||| ||||| Sbjct 17701903 ATAGATGTTGCTTGTATAGGGCTCAATGGATTCGTTATTGCCCAAGATCTGGGCTGTGGA 17701844 Query 114001 GGCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 114033 |||||||||||| || |||| || || ||||| Sbjct 17701843 GGCTGTGGGCATAGGGGCCAGCAGCAGACTGTT 17701811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597345991208520