Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq14 118 1e-21 seq7 116 4e-21 >seq14 Length=34043612 Score = 118 bits (130), Expect = 1e-21 Identities = 157/216 (73%), Gaps = 3/216 (1%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCG-ATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||||| || |||| || | | || || || |||||||| || | || |||||| | || Sbjct 21660188 AGCACCAGGTGAAGGGTGGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATC 21660129 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||| |||||||||||||| | || || ||||||||||| || || || || || || || Sbjct 21660128 TTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTC 21660069 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || | |||||||| ||| ||| | || |||| || || || || | || | ||| Sbjct 21660068 CTGGA--TTTTGCTTGACATTCTCGATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGT 21660011 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 |||||| |||| || ||||| || || ||||| || Sbjct 21660010 CTTGCCAGTCAGGGTCTTTACAAAGATCTGCATCTT 21659975 Score = 98.7 bits (108), Expect = 1e-15 Identities = 152/213 (71%), Gaps = 3/213 (1%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| || |||| || || || || || |||||||| || | || |||||| | ||| Sbjct 21660640 AGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCT 21660581 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || |||||||||||||| | || || ||||||||||| || || || || || || || Sbjct 21660580 TCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGG-GGGATGCCCTCCTTGTCC 21660522 Query 64352 TGTATTTTTTGCTTT-ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || || |||| ||| ||| | || |||| || || || || | || | ||| Sbjct 21660521 TGGATCTTGGCCTTTGACATTCTCGATGGTGTCACTGGGCTCAACCTC-AGGGTGATGGT 21660463 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| || |||| || || || || || ||||| Sbjct 21660462 CTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 21660430 Score = 98.7 bits (108), Expect = 1e-15 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTT-GTAATCTGCGACGGTGCGCGCGTC 64290 ||||| || |||| || || || || || ||||| ||| || | || |||||| | || Sbjct 21660868 AGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTTGTAGTCGGAGAGGGTGCGACCATC 21660809 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 ||| |||||||||||||| | || || ||||||||||| || || || || || || || Sbjct 21660808 TTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTC 21660749 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || ||| ||| ||| ||| | || |||| || || | || | || | ||| Sbjct 21660748 -TGGATCTTTGCCTTGACATTCTCGATGGTGTCACTGGGCTCACCCTCCAGGGTGATGGT 21660690 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| || |||| || || || || || ||||| Sbjct 21660689 CTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 21660657 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| || |||| || || || || || |||||||| || | || |||||| | ||| Sbjct 21660413 AGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCT 21660354 Query 64292 T-CAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTC 64350 | | ||||| |||||||| | || || ||||||||||| || || || ||| | || || Sbjct 21660353 TTCCAGCTGTTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATGCCTCCCTTGTC 21660294 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || || ||| ||| ||| | || |||| || || || || | || | ||| Sbjct 21660293 CTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCAACCTC-AGGGTGATGGT 21660235 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||| || |||| || || || || || ||||| Sbjct 21660234 CTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 21660202 >seq7 Length=46052510 Score = 116 bits (128), Expect = 4e-21 Identities = 156/216 (72%), Gaps = 1/216 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| ||||||| || |||||||| || |||||||| || | | |||||| | ||| Sbjct 22020273 AGCACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCT 22020214 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAAT-TCCTTCTTTTTC 64350 || ||||||||||||||| | || || ||||||||||| || ||||| ||| ||| | | Sbjct 22020213 TCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCC 22020154 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 | | || || ||| ||| ||| | || || | | || || || | || | ||| Sbjct 22020153 TGGCATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCTCGACCTCGAGGGTGATGGT 22020094 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCATTTT 64446 |||||| || | || || ||||| || ||||| || Sbjct 22020093 CTTGCCTGTGAGGGTCTTCACGAAGATCTGCATCTT 22020058 Score = 102 bits (112), Expect = 8e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| ||||||| || |||||||| || |||||||| || | | |||||| | ||| Sbjct 22020956 AGCACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCT 22020897 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTG-GTCGGGAGGAATTCCTTCTTTTTC 64350 || ||||||||||||||| | || || |||||||| ||| || || || || || || || Sbjct 22020896 TCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGCGTCTGGGGGGATGCCCTCCTTGTC 22020837 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || || ||| ||| ||| | || || | | || || || | || | ||| Sbjct 22020836 CTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCTCGACCTCGAGGGTGATGGT 22020777 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||| || | | | | ||||| || ||||| Sbjct 22020776 CTTGCCTGT-GAGGGTCTCACGAAGATCTGCAT 22020745 Score = 100 bits (110), Expect = 3e-16 Identities = 150/212 (71%), Gaps = 1/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| || |||| || || ||||| || |||||||| || | | |||||| | ||| Sbjct 22020500 AGCACCAGGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCT 22020441 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || ||||||||||| ||| | || || ||||||||||| || || || || || || || Sbjct 22020440 TCCAGCTGCTTGCC-GCAAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCC 22020382 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || || ||| ||| ||| | || || | | || || || | || | |||| Sbjct 22020381 TGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCTCGACCTCGAGGGTGATGGTC 22020322 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| || | || || ||||| || ||||| Sbjct 22020321 TTGCCTGTGAGGGTCTTCACGAAGATCTGCAT 22020290 Score = 98.7 bits (108), Expect = 1e-15 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 ||||| |||||| || |||||||| || |||||||| || | |||||| | ||| Sbjct 22020728 AGCACCAGATGAGG-GTGGATTCTTTCTGGATGTTGTAGTCGGAAGAGGTGCGGCCATCT 22020670 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCT-GGTCGGGAGGAATTCCTTCTTTTTC 64350 || ||||||||||||||| | || || ||||||| |||| || || || || || || || Sbjct 22020669 TCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGGTCTGGGGGGATGCCCTCCTTGTC 22020610 Query 64351 TTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGT 64410 || || || ||| ||| ||| | || || | | || || || | || | ||| Sbjct 22020609 CTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCTCGACCTCGAGGGTGATGGT 22020550 Query 64411 CTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 |||||| || | || || ||||| || ||||| Sbjct 22020549 CTTGCCTGTGAGGGTCTTCACGAAGATCTGCAT 22020517 Score = 93.3 bits (102), Expect = 4e-14 Identities = 152/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCG-TC 64290 ||||| ||||||| || |||||||| || |||||||| || | | |||||| || || Sbjct 22021184 AGCACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGGGCCATC 22021125 Query 64291 TTCAAGCTGCTTGCCGG-CATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTT 64349 |||| |||||||||||| || | || || |||||||| ||| ||||| || || || | Sbjct 22021124 TTCA-GCTGCTTGCCGGCCAAAGATCAGACGCTGCTGTCTGGGGGGAATGCCCTCCTTGT 22021066 Query 64350 CTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGG 64409 | || || || ||| ||| ||| | || || | | || || || | || | || Sbjct 22021065 CCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCTCGACCTCGAGGGTGATGG 22021006 Query 64410 TCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || |||| || | || || ||||| || ||||| Sbjct 22021005 TC-TGCCTGTGAGGGTCTTCACGAAGATCTGCAT 22020973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499638435774360