Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq14 91.5 1e-13 seq18 84.2 2e-11 seq7 82.4 8e-11 >seq14 Length=34043612 Score = 91.5 bits (100), Expect = 1e-13 Identities = 137/194 (71%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || |||||||||||| | || || || || || || || |||| Sbjct 21660169 GACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCTTCCAGCTGCTTGCCGGCG 21660110 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| |||||||| ||||| || || || || || ||||| || ||||| || | Sbjct 21660109 AAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGA--TTTTGCTTGACA 21660052 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | |||||| | | ||| ||||| | || | || || |||||||| || ||| Sbjct 21660051 TTCTCGATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTT 21659992 Query 138601 ACAAAAATCTGCAT 138614 ||||| |||||||| Sbjct 21659991 ACAAAGATCTGCAT 21659978 Score = 82.4 bits (90), Expect = 8e-11 Identities = 139/199 (70%), Gaps = 2/199 (1%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTT-GTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGA 138479 |||||||| || ||||| ||||||| | || || || || || || || |||| Sbjct 21660850 GACTCCTTCTGGATGTTTGTAGTCGGAGAGGGTGCGACCATCTTCCAGCTGCTTGCCGGC 21660791 Query 138480 ATAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA 138539 |||| |||||||| ||||| || || || || || ||||| | ||| ||| || | Sbjct 21660790 GAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTG-GATCTTTGCCTTGAC 21660732 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | || | |||||| | | ||| |||| | || | || ||||||||||| || || Sbjct 21660731 ATTCTCGATGGTGTCACTGGGCTCACCCTCCAGGGTGATGGTCTTACCAGTCAGGGTCTT 21660672 Query 138600 TACAAAAATCTGCATGGCT 138618 ||||| ||||||||| || Sbjct 21660671 CACAAAGATCTGCATGCCT 21660653 >seq18 Length=26030928 Score = 84.2 bits (92), Expect = 2e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 52764 AATCCGTTTGAGTTTATGAACAACATTTCGCTTGAGGGCAAGACCAACTTTTTCGAGAAG 52823 ||||| ||||| || ||| | ||||| ||||| ||||||||||||||||| ||||||||| Sbjct 19430613 AATCCCTTTGACTTCATGGAGAACATCTCGCTGGAGGGCAAGACCAACTTCTTCGAGAAG 19430554 Query 52824 CGAGTCGGCGAGTA 52837 |||| || ||||| Sbjct 19430553 AGAGTAGGGGAGTA 19430540 >seq7 Length=46052510 Score = 82.4 bits (90), Expect = 8e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 153303 GCCAGTTCGCAGCTAGCCTCGAGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTG 153362 ||||| || ||||| | ||| || || ||||||| || || || ||| || | ||| Sbjct 17699688 GCCAGCTCACAGCTGGACTCAAGGGCAGCATAGTAGATAGTCTCAAAGATCTGAGTGTTG 17699629 Query 153363 AGAACGGCCGCTTCTTCGCTCTCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGA 153422 || || ||| ||||||| |||| | |||| ||| | |||||| ||||||||| Sbjct 17699628 AGCTTCTGGGCCTCTGCGCTCTCAAACGGAAAACGCATCAGGATAAAGGCATCGGCCAGA 17699569 Query 153423 CCCTGGATACCGACGCCGATGGG 153445 ||||||| ||| | ||||||||| Sbjct 17699568 CCCTGGACACCAATGCCGATGGG 17699546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496256078857680