Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq14 122 8e-23 seq7 100 3e-16 >seq14 Length=34043612 Score = 122 bits (134), Expect = 8e-23 Identities = 144/194 (74%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 126920 GACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCG 126979 ||||| || || || ||||| ||| | |||||| ||| || ||||| || || ||| Sbjct 21660169 GACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCTTCCAGCTGCTTGCCGGCG 21660110 Query 126980 TAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGT 127039 |||||| |||||||| || || || ||||||||||||||| ||||| ||||||| Sbjct 21660109 AAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATTT--TGCTTGACA 21660052 Query 127040 TGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTT 127099 | |||| |||||| | ||| || || | ||| | || ||||| ||||| || ||| Sbjct 21660051 TTCTCGATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTT 21659992 Query 127100 ACAAAAATCTGCAT 127113 ||||| |||||||| Sbjct 21659991 ACAAAGATCTGCAT 21659978 Score = 98.7 bits (108), Expect = 9e-16 Identities = 153/215 (71%), Gaps = 3/215 (1%) Strand=Plus/Minus Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963 ||||| || | || ||||| || || || ||||| ||| | |||||| ||| || Sbjct 21660638 CACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCTTC 21660579 Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023 ||||| || || ||| |||||| |||||||| || || || ||||||||||||||| Sbjct 21660578 CAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGG-ATGCCCTCCTTGTCCTG 21660520 Query 127024 GATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTT 127082 ||| || | |||| | |||| |||||| | ||| || || | ||| | || | Sbjct 21660519 GATCTTGGCCTTTGACATTCTCGATGGTGTCACTGGGCTCAACCTC-AGGGTGATGGTCT 21660461 Query 127083 TGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117 | || ||||| || || ||||| ||||||||| || Sbjct 21660460 TACCAGTCAGGGTCTTCACAAAGATCTGCATGCCT 21660426 Score = 96.9 bits (106), Expect = 3e-15 Identities = 152/215 (71%), Gaps = 2/215 (1%) Strand=Plus/Minus Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATT-GTAATCGCCCATCGTGCGAGAATCGT 126962 ||||| || | || ||||| || || || || ||| ||| | |||||| ||| | Sbjct 21660866 CACCAGGTGAAGGGTGGACTCCTTCTGGATGTTTGTAGTCGGAGAGGGTGCGACCATCTT 21660807 Query 126963 CTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCG 127022 | ||||| || || ||| |||||| |||||||| || || || |||||||||||||| | Sbjct 21660806 CCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTG 21660747 Query 127023 TGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTT 127082 ||| || ||||| | |||| |||||| | ||| | || | ||| | || | Sbjct 21660746 -GATCTTTGCCTTGACATTCTCGATGGTGTCACTGGGCTCACCCTCCAGGGTGATGGTCT 21660688 Query 127083 TGCCGGTCAGAGTTTTTACAAAAATCTGCATGGCT 127117 | || ||||| || || ||||| ||||||||| || Sbjct 21660687 TACCAGTCAGGGTCTTCACAAAGATCTGCATGCCT 21660653 >seq7 Length=46052510 Score = 100 bits (110), Expect = 3e-16 Identities = 153/217 (71%), Gaps = 1/217 (0%) Strand=Plus/Minus Query 126898 TCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGA 126957 ||| | ||||| || | || |||||||| || || ||||| ||| | ||||| Sbjct 22020504 TCGGAGCACCAGGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCC 22020445 Query 126958 ATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTT 127017 ||| || ||||| || || || |||||| |||||||| || || || ||||||||||| Sbjct 22020444 ATCTTCCAGCTGCTTGCC-GCAAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTT 22020386 Query 127018 GTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCAC 127077 |||| ||| || ||| | | || | |||||| | |||||| |||| ||| | Sbjct 22020385 GTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCTCGACCTCGAGGGTGAT 22020326 Query 127078 CGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || ||||| || || || || || || ||||||||| Sbjct 22020325 GGTCTTGCCTGTGAGGGTCTTCACGAAGATCTGCATG 22020289 Score = 95.1 bits (104), Expect = 1e-14 Identities = 152/217 (70%), Gaps = 1/217 (0%) Strand=Plus/Minus Query 126898 TCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGA 126957 ||| | ||||| ||| | || || ||||| || || ||||| ||| | ||||| Sbjct 22020277 TCGGAGCACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCC 22020218 Query 126958 ATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTT 127017 ||| || ||||| || || || |||||| |||||||| || || || ||||||||||| Sbjct 22020217 ATCTTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTGGGGGAATGCCCTCCTT 22020158 Query 127018 GTCC-GTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCA 127076 |||| | || || ||| | | || | |||||| | |||||| |||| ||| | Sbjct 22020157 GTCCTGGCATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCTCGACCTCGAGGGTGA 22020098 Query 127077 CCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || ||||| || || || || || || |||||||| Sbjct 22020097 TGGTCTTGCCTGTGAGGGTCTTCACGAAGATCTGCAT 22020061 Score = 89.7 bits (98), Expect = 5e-13 Identities = 152/218 (70%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 126898 TCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGA 126957 ||| | ||||| ||| | || || ||||| || || ||||| ||| ||||| Sbjct 22020732 TCGGAGCACCAGATG-AGGGTGGATTCTTTCTGGATGTTGTAGTCGGAAGAGGTGCGGCC 22020674 Query 126958 ATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGA-TCGGGAGGTATGCCCTCCT 127016 ||| || ||||| || || || |||||| |||||||| || || || |||||||||| Sbjct 22020673 ATCTTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGGTCTGGGGGGATGCCCTCCT 22020614 Query 127017 TGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCA 127076 ||||| ||| || ||| | | || | |||||| | |||||| |||| ||| | Sbjct 22020613 TGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCTCGACCTCGAGGGTGA 22020554 Query 127077 CCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || ||||| || || || || || || ||||||||| Sbjct 22020553 TGGTCTTGCCTGTGAGGGTCTTCACGAAGATCTGCATG 22020516 Score = 89.7 bits (98), Expect = 5e-13 Identities = 152/218 (70%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 126898 TCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGA 126957 ||| | ||||| ||| | || || ||||| || || ||||| ||| | ||||| Sbjct 22020960 TCGGAGCACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCC 22020901 Query 126958 ATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGA-TCGGGAGGTATGCCCTCCT 127016 ||| || ||||| || || || |||||| |||||||| || || || |||||||||| Sbjct 22020900 ATCTTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGCGTCTGGGGGGATGCCCTCCT 22020841 Query 127017 TGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCA 127076 ||||| ||| || ||| | | || | |||||| | |||||| |||| ||| | Sbjct 22020840 TGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCTCGACCTCGAGGGTGA 22020781 Query 127077 CCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || ||||| || || | | | || || ||||||||| Sbjct 22020780 TGGTCTTGCCTGTGAG-GGTCTCACGAAGATCTGCATG 22020744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475494743308560