Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_012783.2 Length=226205 Score E Sequences producing significant alignments: (Bits) Value seq8 109 8e-19 seq3 96.9 5e-15 seq13 93.3 6e-14 >seq8 Length=32939842 Score = 109 bits (120), Expect = 8e-19 Identities = 174/250 (70%), Gaps = 0/250 (0%) Strand=Plus/Minus Query 8926 CTGAATGGTTGCGGTTTTCACGATGTCTAAACCTACGTCCCCGCCGAAGGTGCTGGGTTT 8985 ||| | || ||| || || || |||| || || || ||| || ||||||||||| || Sbjct 30960244 CTGTAGGGATGCAGTGTTGACAATGTTAAAGCCAACACTCCCACCAAAGGTGCTGGGCTT 30960185 Query 8986 CCAGTACGCCGGGGAGCAGATGACGTTCGCCATGAGCCCTTTCAAGGAAAACGGAGCCCC 9045 ||||||| | || ||||| || || |||| || ||||| | ||| | || || || Sbjct 30960184 CCAGTACTCTGGTGAGCAAATAGGATTTCCCATCAGGCCTTTAAGGGAGTAGGGTGCACC 30960125 Query 9046 CAGCTCGATGATGCTCTCACCGAAGATGGCACCGGGACGCGGTTTTTCGACGATGAAGCC 9105 || ||| | ||| |||| || || ||| || || | || || || || | || || Sbjct 30960124 CATCTCTACCATGGTCTCCCCAAATATGCCATTGGTTCTGGGCTTCTCCACCAGCAAACC 30960065 Query 9106 AGTGTAGAGTTCGACAGCCTCGACGTCGCCATAGAGGGCTTCCAACTCGGCAGCTATCTC 9165 | |||||| || ||||| || || | |||||| | | |||||| | ||||| ||||| Sbjct 30960064 TGGGTAGAGCTCCACAGCATCCACATGGCCATACATCTCCTCCAACACTGCAGCCATCTC 30960005 Query 9166 CTTCTCACCT 9175 ||| || ||| Sbjct 30960004 CTTTTCCCCT 30959995 >seq3 Length=29826154 Score = 96.9 bits (106), Expect = 5e-15 Identities = 125/169 (74%), Gaps = 4/169 (2%) Strand=Plus/Plus Query 9553 TCAGGCAACAGAGAATGCCAGCGGTAGAGGGTATTGAACTCGGCCGCTATTCGGTTCTGG 9612 || |||| ||| | |||||| |||| |||||||||||||| | || || |||||||| Sbjct 6420425 TCGGGCATCAGTGGGTGCCAGTGGTACAGGGTATTGAACTCCGAGGCGATCCGGTTCTGA 6420484 Query 9613 TACTGAAAG-GC-GGTACCGAACAGTAACTCCGGGTCAAAGATTAGCTGGAAGTGGTACC 9670 ||||| ||| || ||| |||||| | ||||||| || | |||| ||||||||| | Sbjct 6420485 TACTGGAAGCGCTGGT--TGAACAGGAGTTCCGGGTTGAACTTGAGCTTGAAGTGGTAGC 6420542 Query 9671 CGCTGAGTTGCTGGACATACTGTGTGATTATAATGTTAATGGTTTCCCC 9719 | || || |||||||| || | || | ||| |||||||| || || Sbjct 6420543 CACTCAGGTGCTGGACGTAGTCCTCAATCACAATTTTAATGGTCTCTCC 6420591 >seq13 Length=36369518 Score = 93.3 bits (102), Expect = 6e-14 Identities = 149/214 (70%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 8966 CCGCCGAAGGTGCTGGGTTTCCAGTACGCCGGGGAGCAGATGACGTTCGCCATGAGCCCT 9025 || || || |||||||| ||||||||| | ||||| ||||| ||| | | || ||| Sbjct 9278489 CCACCAAACGTGCTGGGCTTCCAGTACTCAGGGGAACAGATTGGGTTACCTAGAAGGCCT 9278430 Query 9026 TTCAAGGAAAACGGAGCCCCCAGCTCGATGATGCTCTCACCGAAGATGGCACCGGGACGC 9085 |||| ||| |||||||| |||| || | ||||||||||| || ||||| | | || Sbjct 9278429 TTCAGGGAGAACGGAGCTCCCATTTCCACCATGCTCTCACCAAATATGGCTTGGTGGCGT 9278370 Query 9086 GGTTTTTCGACGATGAAGCCAGTGTAGAGTTCGACAGCCTCGACGTCGCCATAGAGGGCT 9145 | || || | |||| | | | ||||| || | || || | ||| |||||||| | Sbjct 9278369 GTCTTCTCCAGCATGAGGGCGGGGTAGAACTCCAGCGCATCTATGTCACCATAGAGCTCC 9278310 Query 9146 TCCAACTCGGCAGCTATCTCCTTCTCACCTACAA 9179 |||| ||| || | ||| | ||| |||| || Sbjct 9278309 TCCAGCTCCCTGGCAACCTCTTCCTCCCCTAAAA 9278276 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 723718781514600