Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq18 109 7e-19 seq7 91.5 2e-13 >seq18 Length=26030928 Score = 109 bits (120), Expect = 7e-19 Identities = 104/133 (78%), Gaps = 0/133 (0%) Strand=Plus/Plus Query 127539 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCT 127598 ||||||| | | ||||| ||||| |||||| ||| || |||||||| |||||||||| Sbjct 19431668 CCTCGTCTCTGCTAATGAGCTCATTGGAGAAGGTCAGGCCAGGCATGAGCCCCCGCTTCT 19431727 Query 127599 TCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACG 127658 ||| ||||||||| ||| ||| || ||||||||||| |||||||| ||| || || | Sbjct 19431728 TCAGCCAGAAAATGGCAGCAAAGGATCCAGAGAAGAAAATCCCCTCAACAGCAGCAAAAG 19431787 Query 127659 CAAATAGACGCTC 127671 | | | |||||| Sbjct 19431788 CGACAACACGCTC 19431800 >seq7 Length=46052510 Score = 91.5 bits (100), Expect = 2e-13 Identities = 76/93 (82%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 115902 ATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGA 115961 |||||||||| | || || ||||||| | | || || || |||||||| ||||||||||| Sbjct 17701903 ATAGATGTTGCTTGTATAGGGCTCAATGGATTCGTTATTGCCCAAGATCTGGGCTGTGGA 17701844 Query 115962 GGCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 115994 |||||||||||| || |||| || || ||||| Sbjct 17701843 GGCTGTGGGCATAGGGGCCAGCAGCAGACTGTT 17701811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613499385452040