Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq14 120 7e-22 seq7 114 3e-20 >seq14 Length=34043612 Score = 120 bits (132), Expect = 7e-22 Identities = 154/210 (73%), Gaps = 3/210 (1%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCG-ACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 || || ||||| || || | ||||||| |||| ||||||||| | | || | ||||| Sbjct 21660188 AGCACCAGGTGAAGGGTGGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATC 21660129 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||||||||||| ||||||||||| |||||||||||||| || || || || || Sbjct 21660128 TTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTC 21660069 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| | |||||||| || |||| |||||| | | || || |||| ||||| || Sbjct 21660068 CTGGA--TTTTGCTTGACATTCTCGATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGT 21660011 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || || || || || ||||| || || Sbjct 21660010 CTTGCCAGTCAGGGTCTTTACAAAGATCTG 21659981 Score = 120 bits (132), Expect = 7e-22 Identities = 155/210 (74%), Gaps = 3/210 (1%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| || || |||||||| |||| ||||||||| | | || | |||||| Sbjct 21660640 AGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCT 21660581 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 ||||||||||| ||||||||||| |||||||||||||| || | ||| || | ||| Sbjct 21660580 TCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGATGCCCTCCTTG-TCC 21660522 Query 199538 TGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 || ||||| | || || |||| |||||| | | || || | || ||||| || Sbjct 21660521 TGGATCTTGGCCTTTGACATTCTCGATGGTGTCACTGGGCTCAACCT-CAGGGTGATGGT 21660463 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||| || || || |||||||| || || Sbjct 21660462 CTTACCAGTCAGGGTCTTCACAAAGATCTG 21660433 Score = 120 bits (132), Expect = 7e-22 Identities = 154/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTT-GTAGTCAGCCAAAGTCCTTCCATC 199476 || || ||||| || || |||||||| |||| ||| |||||| | | || | ||||| Sbjct 21660868 AGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTTGTAGTCGGAGAGGGTGCGACCATC 21660809 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||||||||||| ||||||||||| |||||||||||||| || || || || | Sbjct 21660808 TTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTC-CTTGT 21660750 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| |||||| ||| || |||| |||||| | | || | |||| ||||| || Sbjct 21660749 CTGGATCTTTGCCTTGACATTCTCGATGGTGTCACTGGGCTCACCCTCCAGGGTGATGGT 21660690 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||| || || || |||||||| || || Sbjct 21660689 CTTACCAGTCAGGGTCTTCACAAAGATCTG 21660660 Score = 114 bits (126), Expect = 3e-20 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| || || |||||||| |||| ||||||||| | | || | |||||| Sbjct 21660413 AGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCT 21660354 Query 199478 T-CCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 | ||||||| || ||||||||||| |||||||||||||| || || ||| | || Sbjct 21660353 TTCCAGCTGTTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATGCCTCCCTTGTC 21660294 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| ||| || |||| |||||| | | || || | || ||||| || Sbjct 21660293 CTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCAACCT-CAGGGTGATGGT 21660235 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||| || || || |||||||| || || Sbjct 21660234 CTTACCAGTCAGGGTCTTCACAAAGATCTG 21660205 >seq7 Length=46052510 Score = 114 bits (126), Expect = 3e-20 Identities = 155/215 (72%), Gaps = 1/215 (0%) Strand=Plus/Minus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 |||| || || ||||| || || ||||| || |||| ||||||||| | | || | Sbjct 22020506 AGTCGGAGCACCAGGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGG 22020447 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 ||||||||||||||||| ||| | ||||| |||||||||||||| || || || || Sbjct 22020446 CCATCTTCCAGCTGCTTGCCG-CAAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCC 22020388 Query 199532 CGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTG 199591 ||||| ||||| |||||| || | |||||| ||| || || || | ||| Sbjct 22020387 TTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCTCGACCTCGAGGGTG 22020328 Query 199592 ATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || ||||| || ||||| || ||||| || || || Sbjct 22020327 ATGGTCTTGCCTGTGAGGGTCTTCACGAAGATCTG 22020293 Score = 111 bits (122), Expect = 4e-19 Identities = 155/216 (72%), Gaps = 1/216 (0%) Strand=Plus/Minus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 |||| || || || || || || || || || |||| ||||||||| | | || | Sbjct 22020279 AGTCGGAGCACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGG 22020220 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCT 199531 ||||||||||||||||| ||||| ||||| |||||||||||||| || ||| || || Sbjct 22020219 CCATCTTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTGGGGGAATGCCCTCC 22020160 Query 199532 CGCTCCT-GAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGT 199590 |||| | ||||| |||||| || | |||||| ||| || || || | || Sbjct 22020159 TTGTCCTGGCATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCTCGACCTCGAGGGT 22020100 Query 199591 GATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| ||||| || ||||| || ||||| || || || Sbjct 22020099 GATGGTCTTGCCTGTGAGGGTCTTCACGAAGATCTG 22020064 Score = 104 bits (114), Expect = 6e-17 Identities = 143/199 (72%), Gaps = 1/199 (1%) Strand=Plus/Minus Query 199429 GAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGCTT 199488 ||| || || || || |||| ||||||||| | | || | ||||||||||||||||| Sbjct 22020718 GAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAAGAGGTGCGGCCATCTTCCAGCTGCTT 22020659 Query 199489 TCCGGCGAAGATGAGACGCTGCT-GGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTTT 199547 ||||| ||||| |||||||||| |||| || || || || ||||| ||||| Sbjct 22020658 GCCGGCAAAGATCAGACGCTGCTGGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGG 22020599 Query 199548 GCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTGA 199607 |||||| || | |||||| ||| || || || | ||||| ||||| || |||| Sbjct 22020598 CCTTCACATTCTCAATGGTGTCGCTTGGCTCGACCTCGAGGGTGATGGTCTTGCCTGTGA 22020539 Query 199608 GAGTTTTCACAAAAATTTG 199626 | || ||||| || || || Sbjct 22020538 GGGTCTTCACGAAGATCTG 22020520 Score = 98.7 bits (108), Expect = 2e-15 Identities = 153/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 199412 AGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTT 199471 |||| || || || || || || || || || |||| ||||||||| | | || | Sbjct 22020962 AGTCGGAGCACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGG 22020903 Query 199472 CCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTG-GTCCGGAAAAATTCCTTC 199530 ||||||||||||||||| ||||| ||||| ||||||||||| ||| || || || || Sbjct 22020902 CCATCTTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGCGTCTGGGGGGATGCCCTC 22020843 Query 199531 TCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGT 199590 ||||| ||||| |||||| || | |||||| ||| || || || | || Sbjct 22020842 CTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCTCGACCTCGAGGGT 22020783 Query 199591 GATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| ||||| || ||||| | | |||| || || || Sbjct 22020782 GATGGTCTTGCCTGTGAG-GGTCTCACGAAGATCTG 22020748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178906208073273