Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq14 143 3e-29 seq7 123 3e-23 >seq14 Length=34043612 Score = 143 bits (158), Expect = 3e-29 Identities = 150/196 (77%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||||||||| || ||||| | || || ||||||||||||||||| Sbjct 21660167 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCTTCCAGCTGCTTGCCGGCGAA 21660108 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 |||| ||||||||||| | || | || |||||||||| || || | ||||| | Sbjct 21660107 GATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGA--TTTTGCTTGACATT 21660050 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | | ||||| || | || || |||| |||||||| ||||| ||||| || || || Sbjct 21660049 CTCGATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTTAC 21659990 Query 46582 AAAGATTTGCATTTTG 46597 |||||| ||||| ||| Sbjct 21659989 AAAGATCTGCATCTTG 21659974 Score = 138 bits (152), Expect = 1e-27 Identities = 171/230 (74%), Gaps = 3/230 (1%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 ||||||| || | ||| | |||||| || | || |||||| ||||| |||||||||| Sbjct 21660657 TGCCTCCCCTCAGACGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGG 21660598 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | || ||||| | || || ||||||||||||||||| |||| ||||||||||| | | Sbjct 21660597 AGAGGGTGCGACCATCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTG-GG 21660539 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTC-TTGAGCGTCGCCACCGTGTCGCTCGATTCC 46543 | | || |||||||||| |||||| | |||| || | | ||||| || | || Sbjct 21660538 GGATGCCCTCCTTGTCCTGGATCTTGGCCTTTGACATTCTCGATGGTGTCACTGGGCTCA 21660479 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | || |||||||| || || ||||| || || |||||||| ||||| Sbjct 21660478 ACCT-CAGGGTGATGGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 21660430 Score = 138 bits (152), Expect = 1e-27 Identities = 170/230 (74%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATT-GTAGTCG 46423 ||||||| || | ||| | |||||| || | || |||||| ||||| || ||||||| Sbjct 21660885 TGCCTCCCCTCAGACGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTTGTAGTCG 21660826 Query 46424 GATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCC 46483 || || ||||| | || || ||||||||||||||||| |||| ||||||||||| | Sbjct 21660825 GAGAGGGTGCGACCATCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGG 21660766 Query 46484 GGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCC 46543 || | || |||||||| | |||||| ||||| || | | ||||| || | || Sbjct 21660765 GGGATGCCCTCCTTGT-CTGGATCTTTGCCTTGACATTCTCGATGGTGTCACTGGGCTCA 21660707 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | |||| |||||||| || || ||||| || || |||||||| ||||| Sbjct 21660706 CCCTCCAGGGTGATGGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 21660657 Score = 129 bits (142), Expect = 7e-25 Identities = 168/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 ||||||| || | ||| | |||||| || | || |||||| ||||| |||||||||| Sbjct 21660430 TGCCTCCCCTCAGACGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGG 21660371 Query 46425 ATAGAGTGCGCTCGTCGT-CGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCC 46483 | || ||||| | || | | ||||| ||||||||||| |||| ||||||||||| | Sbjct 21660370 AGAGGGTGCGACCATCTTTCCAGCTGTTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGG 21660311 Query 46484 GGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCC 46543 || | || |||||||| |||||| ||||| || | | ||||| || | || Sbjct 21660310 GGGATGCCTCCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCA 21660251 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || | || |||||||| || || ||||| || || |||||||| ||||| Sbjct 21660250 ACCT-CAGGGTGATGGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 21660202 Score = 98.7 bits (108), Expect = 1e-15 Identities = 166/233 (71%), Gaps = 8/233 (3%) Strand=Plus/Minus Query 46364 TTGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCG 46423 ||||| || | | ||| | |||||| || | || |||||| ||||| ||||||||| Sbjct 21661112 TTGCCACCACGGAGACGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCG 21661053 Query 46424 GATAGAGTGCGCTCGTCGT-CGAGCTGCTTGCCGGCGAATATCAAGCGCTGCT--GGTCG 46480 || || ||||| | || | | |||| ||| ||||||| |||| ||||||| |||| Sbjct 21661052 GAGAGGGTGCGACCATCTTCCCCGCTG-TTG-CGGCGAAGATCAGACGCTGCTTGGGTCT 21660995 Query 46481 GCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGAT 46540 | || | || |||||||| ||||| | || || | || | | ||||| || | Sbjct 21660994 G-GGGGATGCCTCCCTTGTCCTGGATCTGC--CTGGAACTTCTCAATGGTGTCACTGGGC 21660938 Query 46541 TCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || |||| |||||||| || || ||||| || || |||||||| ||||| Sbjct 21660937 TCAACCTCCAGGGTGATGGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 21660885 >seq7 Length=46052510 Score = 123 bits (136), Expect = 3e-23 Identities = 168/233 (72%), Gaps = 1/233 (0%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| || || | || | ||||||||| | || || || ||||| |||||||||| Sbjct 22020290 TGCCGCCCCTGAGTCGGAGCACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGG 22020231 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | || ||||| | || || |||||||||||||| || |||| ||||||||||| | | Sbjct 22020230 AAAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTGGGG 22020171 Query 46485 GCACGCTCTCCTTGTCCATG-ATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCC 46543 | | || |||||||||| | ||||| ||| | || | | |||||||| | || Sbjct 22020170 GAATGCCCTCCTTGTCCTGGCATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCTCG 22020111 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTT 46596 || || | |||||||| ||||| || || || || || ||||| ||||| || Sbjct 22020110 ACCTCGAGGGTGATGGTCTTGCCTGTGAGGGTCTTCACGAAGATCTGCATCTT 22020058 Score = 122 bits (134), Expect = 1e-22 Identities = 165/229 (72%), Gaps = 1/229 (0%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| || || | || | |||||| || | || ||| || ||||| |||||||||| Sbjct 22020517 TGCCGCCCCTGAGTCGGAGCACCAGGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCGG 22020458 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | || ||||| | || || |||||||||||| | || |||| ||||||||||| | | Sbjct 22020457 AAAGGGTGCGGCCATCTTCCAGCTGCTTGCCG-CAAAGATCAGACGCTGCTGGTCTGGGG 22020399 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | || |||||||||| |||||| ||| | || | | |||||||| | || | Sbjct 22020398 GGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCTCGA 22020339 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || | |||||||| ||||| || || || || || ||||| ||||| Sbjct 22020338 CCTCGAGGGTGATGGTCTTGCCTGTGAGGGTCTTCACGAAGATCTGCAT 22020290 Score = 114 bits (126), Expect = 1e-20 Identities = 167/231 (72%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| || || | || | ||||||||| | || || || ||||| |||||||||| Sbjct 22020745 TGCCGCCCCTGAGTCGGAGCACCAGATG-AGGGTGGATTCTTTCTGGATGTTGTAGTCGG 22020687 Query 46425 ATAGAG-TGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCT-GGTCGGC 46482 | |||| |||| | || || |||||||||||||| || |||| ||||||| |||| | Sbjct 22020686 A-AGAGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGGTCTGG 22020628 Query 46483 CGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTC 46542 || | || |||||||||| |||||| ||| | || | | |||||||| | || Sbjct 22020627 GGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCTC 22020568 Query 46543 CACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || | |||||||| ||||| || || || || || ||||| ||||| Sbjct 22020567 GACCTCGAGGGTGATGGTCTTGCCTGTGAGGGTCTTCACGAAGATCTGCAT 22020517 Score = 114 bits (126), Expect = 1e-20 Identities = 165/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| || || | || | ||||||||| | || || || ||||| |||||||||| Sbjct 22020973 TGCCGCCCCTGAGTCGGAGCACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGG 22020914 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTG-GTCGGCC 46483 | || ||||| | || || |||||||||||||| || |||| |||||||| ||| | Sbjct 22020913 AAAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGCGTCTGGG 22020854 Query 46484 GGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCC 46543 || | || |||||||||| |||||| ||| | || | | |||||||| | || Sbjct 22020853 GGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCTCG 22020794 Query 46544 ACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || | |||||||| ||||| || || | | | || ||||| ||||| Sbjct 22020793 ACCTCGAGGGTGATGGTCTTGCCTGTGAG-GGTCTCACGAAGATCTGCAT 22020745 Score = 96.9 bits (106), Expect = 4e-15 Identities = 163/231 (71%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 |||| || || | || | ||||||||| | || || || ||||| |||||||||| Sbjct 22021201 TGCCACCCCTGAGTCGGAGCACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGG 22021142 Query 46425 ATAGAGTGCGCTCG-TCGTCGAGCTGCTTGCCGG-CGAATATCAAGCGCTGCTGGTCGGC 46482 | || ||||| | || || ||||||||||||| | || |||| |||||||| || Sbjct 22021141 AAAGGGTGCGGGCCATCTTC-AGCTGCTTGCCGGCCAAAGATCAGACGCTGCTGTCTGGG 22021083 Query 46483 CGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTC 46542 || | || |||||||||| |||||| ||| | || | | |||||||| | || Sbjct 22021082 GGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCTC 22021023 Query 46543 CACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 || || | ||||||| | |||| || || || || || ||||| ||||| Sbjct 22021022 GACCTCGAGGGTGATGG-TCTGCCTGTGAGGGTCTTCACGAAGATCTGCAT 22020973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565231200275880