Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq7 149 6e-31 seq14 132 5e-26 seq18 87.8 2e-12 >seq7 Length=46052510 Score = 149 bits (164), Expect = 6e-31 Identities = 174/234 (74%), Gaps = 1/234 (0%) Strand=Plus/Plus Query 38239 AAAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGG 38298 |||| ||||| || ||||| || || ||||| ||||| ||||||||| |||| |||||| Sbjct 22020056 AAAAGATGCAGATCTTCGTGAAGACCCTCACAGGCAAGACCATCACCCTCGAGGTCGAGC 22020115 Query 38299 CCACCGACAGCGTGCAAACGCTTAAAGAAAAAAT-CCTCGACAAAGAGGGAATTCCCGCC 38357 | | ||||| | | | | | || | || || || ||||| ||||| |||||| | Sbjct 22020116 CAAGCGACACCATTGAGAATGTGAAGGCCAAGATGCCAGGACAAGGAGGGCATTCCCCCA 22020175 Query 38358 GACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGAC 38417 ||||| ||||| || || | || ||||| |||||||| || | |||||||| |||| Sbjct 22020176 GACCAGCAGCGTCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTTTCCGAC 22020235 Query 38418 TACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||||||||| || ||| | || || ||| ||||||| || | || |||||| Sbjct 22020236 TACAACATCCAGAAAGAATCCACCCTTCATCTGGTGCTCCGACTCAGGGGCGGC 22020289 Score = 132 bits (146), Expect = 5e-26 Identities = 167/228 (73%), Gaps = 1/228 (0%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| ||||||||| |||| |||||| | | | Sbjct 22020290 ATGCAGATCTTCGTGAAGACCCTCACAGGCAAGACCATCACCCTCGAGGTCGAGCCAAGC 22020349 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || |||| ||||| ||||| || ||| | ||||| Sbjct 22020350 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCAG 22020409 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423 ||||| || || | |||| ||| |||||||| || | |||||||| |||||||||| Sbjct 22020410 CAGCGTCTGATCTTTGCGG-CAAGCAGCTGGAAGATGGCCGCACCCTTTCCGACTACAAC 22020468 Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 ||||| || || | || || || ||||||| || | || |||||| Sbjct 22020469 ATCCAGAAAGAGTCCACCCTTCACCTGGTGCTCCGACTCAGGGGCGGC 22020516 Score = 131 bits (144), Expect = 2e-25 Identities = 168/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| | | | ||||| ||||| ||||||||| |||| |||||| | | | Sbjct 22020745 ATGCAGATCTTCGTGAGACC-CTCACAGGCAAGACCATCACCCTCGAGGTCGAGCCAAGC 22020803 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGAC-CA 38362 |||| | | | | | || | || |||| ||||| ||||| || ||| | ||| || Sbjct 22020804 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACGCA 22020863 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | || ||||| |||||||| || | |||||||| ||||||||| Sbjct 22020864 GCAGCGTCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTTTCCGACTACAA 22020923 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||| || ||| | || || ||| ||||||| || | || |||||| Sbjct 22020924 CATCCAGAAAGAATCCACCCTTCATCTGGTGCTCCGACTCAGGGGCGGC 22020972 Score = 127 bits (140), Expect = 2e-24 Identities = 167/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| ||||||||| |||| |||||| | | | Sbjct 22020517 ATGCAGATCTTCGTGAAGACCCTCACAGGCAAGACCATCACCCTCGAGGTCGAGCCAAGC 22020576 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || |||| ||||| ||||| || ||| | |||| | Sbjct 22020577 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCCA 22020636 Query 38364 -CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | || ||||| |||||||| || | |||||| ||||||||| Sbjct 22020637 GCAGCGTCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCTCTTCCGACTACAA 22020696 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||| || ||| | || || ||| ||||||| || | || |||||| Sbjct 22020697 CATCCAGAAAGAATCCACCCT-CATCTGGTGCTCCGACTCAGGGGCGGC 22020744 Score = 113 bits (124), Expect = 5e-20 Identities = 164/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| |||| | |||||||| |||| |||||| | | | Sbjct 22020973 ATGCAGATCTTCGTGAAGACCCTCACAGGCAGA-CCATCACCCTCGAGGTCGAGCCAAGC 22021031 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || |||| ||||| ||||| |||||| || || Sbjct 22021032 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATTCCCCCCAGACAG 22021091 Query 38364 CAGCGGCTCAT-TTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || || || ||||| |||||| | | |||||||| ||||||||| Sbjct 22021092 CAGCGTCTGATCTTTGGCCGGCAAGCAGCTGAAGATGGCCCGCACCCTTTCCGACTACAA 22021151 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||| || ||| | || || ||| ||||||| || | || || ||| Sbjct 22021152 CATCCAGAAAGAATCCACCCTTCATCTGGTGCTCCGACTCAGGGGTGGC 22021200 >seq14 Length=34043612 Score = 132 bits (146), Expect = 5e-26 Identities = 168/226 (74%), Gaps = 5/226 (2%) Strand=Plus/Plus Query 38241 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCC 38300 || ||||| || || ||||| || || || ||||| ||||||||| | || || ||| || Sbjct 21659975 AAGATGCAGATCTTTGTAAAGACCCTGACTGGCAAGACCATCACCCTGGAGGTTGAGCCC 21660034 Query 38301 ACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGA 38359 | |||| | | | || | | ||| |||| ||| ||||| ||||| || ||| | || Sbjct 21660035 AGTGACACCATCGAGAATG--TCAAGCAAAA-TCCAGGACAAGGAGGGCATCCCCCCAGA 21660091 Query 38360 CCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTA 38419 ||| ||||| || || | ||| ||||| |||||||| || | ||||||||| |||||| Sbjct 21660092 CCAGCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAAGATGGTCGCACCCTCTCCGACTA 21660151 Query 38420 CAACATCCAAAAGGA-AGCGACGCTGCATTTGGTGCTGCGTTTGAG 38464 ||||||||| ||||| | || || || ||||||| ||| |||| Sbjct 21660152 CAACATCCAGAAGGAGTCCCACCCTTCACCTGGTGCTCCGTCTGAG 21660197 Score = 123 bits (136), Expect = 2e-23 Identities = 167/229 (73%), Gaps = 3/229 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || || || ||||||||| | || || ||| ||| Sbjct 21660430 ATGCAGATCTTTGTGAAGACCCTGACTGGTAAGACCATCACCCT-GAGGTTGAGCCCAGT 21660488 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | | | |||| || |||| ||||| ||||| || ||| | ||||| Sbjct 21660489 GACACCATCGAGAATGTCAAAGGCCAAGATCCAGGACAAGGAGGGCATCCCC-CAGACCA 21660547 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | ||| ||||| |||||||| || | ||||||||| ||||||||| Sbjct 21660548 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAAGATGGTCGCACCCTCTCCGACTACAA 21660607 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||| ||||| | || || || ||||||| ||| |||| || ||| Sbjct 21660608 CATCCAGAAGGAGTCCACCCTTCACCTGGTGCTCCGTCTGAGGGGAGGC 21660656 Score = 118 bits (130), Expect = 1e-21 Identities = 165/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || || || || || || || || || ||||||||| | || || ||| ||| Sbjct 21660202 ATGCAGATCTTTGTGAAGACCCTGACTGGTAAGACCATCACCCT-GAGGTTGAGCCCAGT 21660260 Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363 |||| | | | | | || | || |||| ||||| | || || ||| | ||||| Sbjct 21660261 GACACCATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGGAGGCATCCCCCCAGACCAG 21660320 Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGAC-GACGAGCGCACCCTCAACGACTACAA 38422 ||||| || || | ||| |||||||||||||| || | ||||||||| ||||||||| Sbjct 21660321 CAGCGTCTGATCTTCGCCGGCAAACAGCTGGAAAGATGGTCGCACCCTCTCCGACTACAA 21660380 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||| ||||| | || || || ||||||| ||| |||| || ||| Sbjct 21660381 CATCCAGAAGGAGTCCACCCTTCACCTGGTGCTCCGTCTGAGGGGAGGC 21660429 >seq18 Length=26030928 Score = 87.8 bits (96), Expect = 2e-12 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 133279 ACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATG 133338 ||||| || || ||||| ||||| || || || |||||||| ||||||||||| |||| Sbjct 19432556 ACCAGGTTCTCATTGACAATGCCATCACTAGCAGCGAAAAATGCCAGCACGTGAGAGATG 19432615 Query 133339 AAATGGCGCTCGTTGTCGTTCAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACC 133398 || | |||||| | || |||||| |||||||| | ||| |||||||| || ||| Sbjct 19432616 AAGTAGCGCTCCTCATCCTTCAAGGACTCCCAGTGCTGTACGTCTTTGGACAGATCGACC 19432675 Query 133399 T 133399 | Sbjct 19432676 T 19432676 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500166429048960