Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq3 93.3 5e-14 seq1 84.2 3e-11 seq18 82.4 9e-11 >seq3 Length=29826154 Score = 93.3 bits (102), Expect = 5e-14 Identities = 56/59 (95%), Gaps = 0/59 (0%) Strand=Plus/Minus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT 136775 ||||||||||||||||||||||||||| |||||||||||||| ||||||||| |||||| Sbjct 29018682 TAGCTCAGTTGGTTAGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGT 29018624 >seq1 Length=40371802 Score = 84.2 bits (92), Expect = 3e-11 Identities = 64/75 (85%), Gaps = 2/75 (3%) Strand=Plus/Plus Query 136717 TAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCCCCGT- 136775 ||||||||||||||||||||| ||||| ||||||| |||||| ||||||||| ||||| Sbjct 28305478 TAGCTCAGTTGGTTAGAGCGTCGTGCTAATAACGCGAAGGTCGCGGGTTCGATACCCGTA 28305537 Query 136776 -TGGGAACAGCTTTT 136789 ||| ||| ||||| Sbjct 28305538 CTGGCCACACCTTTT 28305552 >seq18 Length=26030928 Score = 82.4 bits (90), Expect = 9e-11 Identities = 90/120 (75%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 119529 ATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCTCTTTTCTTTAGCCAAAAGATG 119588 ||||||||||| |||| || ||||||||||| || | ||||| ||||| || ||| Sbjct 19431682 ATGAGCTCATTGGAGAAGGTCAGGCCAGGCATGAGCCCCCGCTTCTTCAGCCAGAAAATG 19431741 Query 119589 GCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAGGCGAAAGCGAATAGACGCTCA 119648 ||| ||| |||||| ||||| || ||||| ||| || ||||||| | ||||||| Sbjct 19431742 GCAGCAAAGGATCCAGAGAAGAAAATCCCCTCAACAGCAGCAAAAGCGACAACACGCTCA 19431801 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588968497918200