Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq18 91.5 2e-13 seq7 87.8 2e-12 seq10 82.4 9e-11 >seq18 Length=26030928 Score = 91.5 bits (100), Expect = 2e-13 Identities = 102/134 (76%), Gaps = 2/134 (1%) Strand=Plus/Plus Query 117293 CCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCGCTTCT 117352 |||| |||| | ||| || ||||| |||||| ||||| |||||||| |||||||||| Sbjct 19431668 CCTCGTCTCTGCTAATGAGCTCATTGGAGAAGGTCAGGCCAGGCATGAGCCCCCGCTTCT 19431727 Query 117353 TCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 117411 ||| ||| |||| || ||| || || || |||||||| || ||||| ||| ||||| Sbjct 19431728 TCAGCCAGAAAATGGCAGCA-AAGGATCCAGAGAAGAAAATCCCCTCAACAGCAGCAAAA 19431786 Query 117412 GCAAAAAGGCGCTC 117425 || | || ||||| Sbjct 19431787 GCGACAACACGCTC 19431800 >seq7 Length=46052510 Score = 87.8 bits (96), Expect = 2e-12 Identities = 75/93 (81%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 105934 ATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGA 105993 ||||||||| | || ||||| |||| | |||| ||||| |||||||| || || ||||| Sbjct 17701903 ATAGATGTTGCTTGTATAGGGCTCAATGGATTCGTTATTGCCCAAGATCTGGGCTGTGGA 17701844 Query 105994 GGCTGTTGGCATTGGTGCCATCAAAAGACTGTT 106026 |||||| ||||| || |||| || |||||||| Sbjct 17701843 GGCTGTGGGCATAGGGGCCAGCAGCAGACTGTT 17701811 >seq10 Length=26897606 Score = 82.4 bits (90), Expect = 9e-11 Identities = 94/124 (76%), Gaps = 2/124 (2%) Strand=Plus/Minus Query 117293 CCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACCCCGCTTCT 117352 ||||||||| | || || ||||| ||| || || || ||||| || || | ||| | Sbjct 26346948 CCTCATCTCTGCTGATGAGCTCATTGGAGTAGGTGAGTCCCGGCATCAGGCCTCTCTTTT 26346889 Query 117353 TCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 117411 | |||||||| || || ||| |||||||| ||||||||||| |||||||| ||||| Sbjct 26346888 TTAACCAATAGATGGCAGCA-AATGACCCTGAGAAGAAGATTCCCTCCACTGCTGCAAAG 26346830 Query 117412 GCAA 117415 |||| Sbjct 26346829 GCAA 26346826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589973285119560