Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq7 140 7e-28 seq14 136 9e-27 >seq7 Length=46052510 Score = 140 bits (154), Expect = 7e-28 Identities = 167/224 (75%), Gaps = 7/224 (3%) Strand=Plus/Minus Query 194920 CTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTT 194979 ||||||| | || |||||||| ||||||||||| || || ||||| |||| ||| || Sbjct 22020509 CTGAGTCGGAGCACCAGGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAAAGGGTG 22020450 Query 194980 CTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039 | |||||||| |||||||| || || ||||| || || || |||||||| || ||||| Sbjct 22020449 CGGCCATCTTCCAGCTGCTTGCC-GCAAAGATCAGACGCTGCTGGTCTGGGGGGATGCCC 22020391 Query 195040 TCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTT---TCCACTTCA 195096 || ||||| || || || ||| || |||||||||||||| ||| || || || Sbjct 22020390 TCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTC---GCTTGGCTCGACCTCG 22020334 Query 195097 AGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| | ||||| ||||| | || || ||||| | ||||| Sbjct 22020333 AGGGTGATGGTCTTGCCTGTGAGGGTCTTCACGAAGATCTGCAT 22020290 Score = 132 bits (146), Expect = 1e-25 Identities = 166/225 (74%), Gaps = 7/225 (3%) Strand=Plus/Minus Query 194920 CTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTT 194979 ||||||| | || || ||||| ||||| ||||| || || ||||| |||| ||| || Sbjct 22020282 CTGAGTCGGAGCACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAAAGGGTG 22020223 Query 194980 CTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039 | |||||||| |||||||| || || ||||| || || || |||||||| |||||||| Sbjct 22020222 CGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTGGGGGAATGCCC 22020163 Query 195040 TCTTTGTCTTGAATTTTTTGC-TTGACGTTCTCAATGGTGTCCGAACTT---TCCACTTC 195095 || ||||| || | || || || || |||||||||||||| ||| || || || Sbjct 22020162 TCCTTGTCCTGGCATCTTGGCCTTCACATTCTCAATGGTGTC---GCTTGGCTCGACCTC 22020106 Query 195096 AAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| | ||||| ||||| | || || ||||| | ||||| Sbjct 22020105 GAGGGTGATGGTCTTGCCTGTGAGGGTCTTCACGAAGATCTGCAT 22020061 Score = 122 bits (134), Expect = 2e-22 Identities = 149/201 (74%), Gaps = 7/201 (3%) Strand=Plus/Minus Query 194920 CTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTT 194979 ||||||| | || || ||||| ||||| ||||| || || ||||| |||| ||| || Sbjct 22020965 CTGAGTCGGAGCACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAAAGGGTG 22020906 Query 194980 CTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTG-GTCTGGAGGAATGCC 195038 | |||||||| |||||||| || || ||||| || || || || |||||| || ||||| Sbjct 22020905 CGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGCGTCTGGGGGGATGCC 22020846 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTT---TCCACTTC 195095 || ||||| || || || ||| || |||||||||||||| ||| || || || Sbjct 22020845 CTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTC---GCTTGGCTCGACCTC 22020789 Query 195096 AAGGGTAACCGTCTTTCCTGT 195116 ||||| | ||||| ||||| Sbjct 22020788 GAGGGTGATGGTCTTGCCTGT 22020768 Score = 114 bits (126), Expect = 3e-20 Identities = 165/226 (73%), Gaps = 10/226 (4%) Strand=Plus/Minus Query 194920 CTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTT 194979 ||||||| | || || ||| | ||||| ||||| || || ||||| |||| ||||| | Sbjct 22020737 CTGAGTCGGAGCACCAGATGAGG-GTGGATTCTTTCTGGATGTTGTAGTCGG-AAGAGGT 22020680 Query 194980 -CTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGG-TCTGGAGGAATGC 195037 | |||||||| |||||||| || || ||||| || || || ||| ||||| || |||| Sbjct 22020679 GCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGGTCTGGGGGGATGC 22020620 Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTT---TCCACTT 195094 | || ||||| || || || ||| || |||||||||||||| ||| || || | Sbjct 22020619 CCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTC---GCTTGGCTCGACCT 22020563 Query 195095 CAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 | ||||| | ||||| ||||| | || || ||||| | ||||| Sbjct 22020562 CGAGGGTGATGGTCTTGCCTGTGAGGGTCTTCACGAAGATCTGCAT 22020517 Score = 100 bits (110), Expect = 6e-16 Identities = 164/227 (72%), Gaps = 12/227 (5%) Strand=Plus/Minus Query 194920 CTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTT 194979 ||||||| | || || ||||| ||||| ||||| || || ||||| |||| ||| || Sbjct 22021193 CTGAGTCGGAGCACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAAAGGGTG 22021134 Query 194980 CTC-CCATCTTCGAGCTGCTTACCTGCGAA-GATAAGTCGTTGTTGGTCTGGAGG-AATG 195036 | |||||||| |||||||| || || || ||| || || || || ||||| || |||| Sbjct 22021133 CGGGCCATCTTC-AGCTGCTTGCCGGCCAAAGATCAGACGCTGCTG-TCTGGGGGGAATG 22021076 Query 195037 CCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTT---TCCACT 195093 || || ||||| || || || ||| || |||||||||||||| ||| || || Sbjct 22021075 CCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTC---GCTTGGCTCGACC 22021019 Query 195094 TCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || ||||| | ||| | ||||| | || || ||||| | ||||| Sbjct 22021018 TCGAGGGTGATGGTC-TGCCTGTGAGGGTCTTCACGAAGATCTGCAT 22020973 >seq14 Length=34043612 Score = 136 bits (150), Expect = 9e-27 Identities = 160/213 (75%), Gaps = 9/213 (4%) Strand=Plus/Minus Query 194932 ACAAGGTGAAGAGTGG-ACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 || |||||||| |||| |||| || || || ||||| |||| || || | |||||||| Sbjct 21660185 ACCAGGTGAAGGGTGGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCTTC 21660126 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 |||||||| || |||||||| || || || |||||||| || ||||| || ||||| || Sbjct 21660125 CAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTG 21660066 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGT 195107 ||||| ||||||| ||||| |||||||| ||| || || || ||||| | || Sbjct 21660065 GATTTT--GCTTGACATTCTCGATGGTGTC---ACTGGGCTCAACCTCCAGGGTGATGGT 21660011 Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| || |||| || ||||| || | ||||| Sbjct 21660010 CTTGCCAGTCAGGGTCTTTACAAAGATCTGCAT 21659978 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109467114677573