Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq7 125 5e-24 seq14 123 2e-23 >seq7 Length=46052510 Score = 125 bits (138), Expect = 5e-24 Identities = 160/216 (74%), Gaps = 7/216 (3%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| |||| ||| ||||||||| ||||| ||||| |||||| | || |||| ||| Sbjct 22020270 ACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCTTCC 22020211 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT- 34891 ||||| || |||||||| || || || ||||||||| | || | ||||||||||| || Sbjct 22020210 AGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTC-CTG 22020152 Query 34892 -AATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 ||||| || || || || || | || | | ||| || |||| ||| ||||| Sbjct 22020151 GCATCTTGGCCTTCAC--ATTCTCAATGGTGTCGCTTGGCTCGACCTCGAGGGTGATGGT 22020094 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATATT 34984 || || ||||| |||||||| ||||||||||| || Sbjct 22020093 CTTGCCTGTGAGGGTCTTCACGAAGATCTGCATCTT 22020058 Score = 120 bits (132), Expect = 2e-22 Identities = 155/211 (73%), Gaps = 5/211 (2%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||| ||||| ||| |||||||| ||||| ||||| |||||| | || |||| ||| Sbjct 22020497 ACCAGGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCTTCC 22020438 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || ||| |||| || || || ||||||||| | || | ||||||||||| Sbjct 22020437 AGCTGCTTGCCG-CAAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGG 22020379 Query 34893 ATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTT 34950 ||||| || || || || || | || | | ||| || |||| ||| ||||| | Sbjct 22020378 ATCTTGGCCTTCAC--ATTCTCAATGGTGTCGCTTGGCTCGACCTCGAGGGTGATGGTCT 22020321 Query 34951 TTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || ||||| |||||||| ||||||||||| Sbjct 22020320 TGCCTGTGAGGGTCTTCACGAAGATCTGCAT 22020290 Score = 109 bits (120), Expect = 4e-19 Identities = 143/195 (73%), Gaps = 5/195 (3%) Strand=Plus/Minus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||||||||| ||||| ||||| ||| | | || |||| |||||||| || |||||||| Sbjct 22020709 TTCTTTCTGGATGTTGTAGTCGGAAGAGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAA 22020650 Query 34850 TATTAGTCGTTGCTGG-TCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGG 34908 || || || |||||| ||| | || | ||||||||||| ||||| || || Sbjct 22020649 GATCAGACGCTGCTGGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCAC-- 22020592 Query 34909 ATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 || || || | || | | ||| || |||| ||| ||||| || || ||||| ||||| Sbjct 22020591 ATTCTCAATGGTGTCGCTTGGCTCGACCTCGAGGGTGATGGTCTTGCCTGTGAGGGTCTT 22020532 Query 34967 CACAAAGATCTGCAT 34981 ||| ||||||||||| Sbjct 22020531 CACGAAGATCTGCAT 22020517 Score = 84.2 bits (92), Expect = 1e-11 Identities = 153/214 (71%), Gaps = 10/214 (5%) Strand=Plus/Minus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTC-ATCATC 34831 |||| |||| ||| ||||||||| ||||| ||||| |||||| | || | ||| || Sbjct 22021181 ACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGGGCCATCTTC 22021122 Query 34832 CAGCTGTTTTCCGGC-AAATATTAGTCGTTGCTGGTCTTGCGGCACC-CCCTCCTTGTCG 34889 ||||| || ||||| ||| || || || ||||| ||| | || | ||||||||||| Sbjct 22021121 -AGCTGCTTGCCGGCCAAAGATCAGACGCTGCTG-TCTGGGGGGAATGCCCTCCTTGTCC 22021064 Query 34890 CTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGG 34947 ||||| || || || || || | || | | ||| || |||| ||| |||| Sbjct 22021063 TGGATCTTGGCCTTCAC--ATTCTCAATGGTGTCGCTTGGCTCGACCTCGAGGGTGATGG 22021006 Query 34948 TTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | | || ||||| |||||||| ||||||||||| Sbjct 22021005 TCTG-CCTGTGAGGGTCTTCACGAAGATCTGCAT 22020973 >seq14 Length=34043612 Score = 123 bits (136), Expect = 2e-23 Identities = 169/230 (73%), Gaps = 7/230 (3%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 |||||||||| | | |||| ||||| ||| || ||||| ||||| ||||| || Sbjct 21660655 CCTCCCCTCAGACGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 21660596 Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874 ||| | || |||| |||||||| || ||||| || || || || ||||||||| | || Sbjct 21660595 AGGGTGCGACCATCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGG- 21660537 Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTG-TTTGACGGATGCT--ATCGATTCACCGGCCTCA 34931 | ||||||||||| ||||| |||||| || || || | |||| || |||| Sbjct 21660536 ATGCCCTCCTTGTCCTGGATCTTGGCCTTTGAC--ATTCTCGATGGTGTCACTGGGCTCA 21660479 Query 34932 ACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || | ||| ||||| || || || || |||||||||||||||||||| Sbjct 21660478 ACCTC-AGGGTGATGGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 21660430 Score = 118 bits (130), Expect = 7e-22 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814 |||||||||| | | |||| ||||| ||| || ||||| ||||| ||||| || Sbjct 21660428 CCTCCCCTCAGACGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 21660369 Query 34815 AGGCTTCGTTCATCAT-CCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGG 34873 ||| | || |||| | |||||||||| ||||| || || || || ||||||||| | || Sbjct 21660368 AGGGTGCGACCATCTTTCCAGCTGTTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGG 21660309 Query 34874 CACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCA 34931 | || ||||||| ||||| ||||| || || || | |||| || |||| Sbjct 21660308 GATGCCTCCCTTGTCCTGGATCTTGGCCTTGAC--ATTCTCGATGGTGTCACTGGGCTCA 21660251 Query 34932 ACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || | ||| ||||| || || || || |||||||||||||||||||| Sbjct 21660250 ACCTC-AGGGTGATGGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 21660202 Score = 118 bits (130), Expect = 7e-22 Identities = 167/230 (73%), Gaps = 6/230 (3%) Strand=Plus/Minus Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTA-TAGTCCGA 34813 |||||||||| | | |||| ||||| ||| || ||||| ||||| ||||| || Sbjct 21660883 CCTCCCCTCAGACGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTTGTAGTCGGA 21660824 Query 34814 AAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGG 34873 ||| | || |||| |||||||| || ||||| || || || || ||||||||| | || Sbjct 21660823 GAGGGTGCGACCATCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGG 21660764 Query 34874 CACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCA 34931 | ||||||||||| ||||| ||||| || || || | |||| || |||| Sbjct 21660763 GATGCCCTCCTTGTC-TGGATCTTTGCCTTGAC--ATTCTCGATGGTGTCACTGGGCTCA 21660707 Query 34932 ACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 | || | ||| ||||| || || || || |||||||||||||||||||| Sbjct 21660706 CCCTCCAGGGTGATGGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 21660657 Score = 116 bits (128), Expect = 2e-21 Identities = 146/196 (74%), Gaps = 6/196 (3%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| || ||| | || |||| |||||||| || ||||| || Sbjct 21660166 TCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCTTCCAGCTGCTTGCCGGCGAAG 21660107 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||||||| | || | ||||||||||| || || || ||||| || Sbjct 21660106 ATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTC-CT-GGATTTTGCTTGAC--AT 21660051 Query 34911 GCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCA 34968 || || | |||| || |||||| || | ||| ||||| || || || || ||||| | Sbjct 21660050 TCTCGATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTTA 21659991 Query 34969 CAAAGATCTGCATATT 34984 ||||||||||||| || Sbjct 21659990 CAAAGATCTGCATCTT 21659975 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324629568355032