Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq7 100 2e-16 >seq7 Length=46052510 Score = 100 bits (110), Expect = 2e-16 Identities = 103/135 (76%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 ||||||||| || || | ||||| ||| || ||| ||||| || || ||||| || || Sbjct 22020289 GCCGCCCCTGAGTCGGAGCACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGA 22020230 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 || | || | || |||| |||||| |||||||| ||||| ||||| || || | ||| Sbjct 22020229 AAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTGGGGG 22020170 Query 48659 AACGCCCTCCTTGTC 48673 || |||||||||||| Sbjct 22020169 AATGCCCTCCTTGTC 22020155 Score = 87.8 bits (96), Expect = 1e-12 Identities = 101/135 (75%), Gaps = 1/135 (1%) Strand=Plus/Minus Query 48539 GCCGCCCCTTAGCCGCAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGA 48598 ||||||||| || || | ||||| || || ||| |||||| || || ||||| || || Sbjct 22020516 GCCGCCCCTGAGTCGGAGCACCAGGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCGGA 22020457 Query 48599 TAGACTTCGATCGTCGTCCAACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGG 48658 || | || | || |||| |||||| ||| |||| ||||| ||||| || || | ||| Sbjct 22020456 AAGGGTGCGGCCATCTTCCAGCTGCTTGCCG-CAAAGATCAGACGCTGCTGGTCTGGGGG 22020398 Query 48659 AACGCCCTCCTTGTC 48673 | |||||||||||| Sbjct 22020397 GATGCCCTCCTTGTC 22020383 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380932869112137