Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq9 219 8e-52 seq11 201 2e-46 seq23 141 2e-28 seq18 100 5e-16 seq7 100 5e-16 seq8 89.7 1e-12 >seq9 Length=20775306 Score = 219 bits (242), Expect = 8e-52 Identities = 196/244 (80%), Gaps = 4/244 (2%) Strand=Plus/Minus Query 241389 GCTGACAGCCTTGGC--ACATGTGCCACAGGACCTCCTGTTTGAGTTGGGCCACCTGGTC 241446 |||||||||| || || |||| || | || | |||||||||||| ||||||||||| Sbjct 11541018 GCTGACAGCCGGAGCTGACGTGTGTCAAA--ACTTTCTGTTTGAGTTGAGCCACCTGGTC 11540961 Query 241447 CCGCAGAACGGACGCGGTATTGGACAGTCCTGCGTTGTCAGACTTGAGCACCTTCACTTT 241506 ||||| | || || || | || || || |||||||| | ||| || |||||||| || Sbjct 11540960 GCGCAGTAGAGAAGCTGTGCTCGAGAGCCCGGCGTTGTCTGTCTTCAGAACCTTCACCTT 11540901 Query 241507 CTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCTGCCAAGCG 241566 ||||| || |||| |||||||||||| |||||| ||||||||||||||||||| ||| Sbjct 11540900 GTCCTCTAGTCGCGAGATGCGTTCCAGCTTGCGCTTCCGGCATTTGGTGGCTGCCATGCG 11540841 Query 241567 GTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCGATCGGAGA 241626 ||||| ||| ||||| || |||||||||||||| ||||||| |||||||||||| || || Sbjct 11540840 GTTCCTGAGCCTCTTGCGCTCCGCCTTGATGCGCTCCTGGTTCTCCATGTCGATTGGGGA 11540781 Query 241627 CTTG 241630 | || Sbjct 11540780 CATG 11540777 >seq11 Length=44859740 Score = 201 bits (222), Expect = 2e-46 Identities = 194/246 (79%), Gaps = 5/246 (2%) Strand=Plus/Plus Query 241389 GCTGACAGCCTTGGC--ACATGTGCCACAGGACCTCCTGTTTGAGTTGGGCCACCTGGTC 241446 |||||||||| || ||||||| || |||| | ||||||||| ||||| || || || Sbjct 4324496 GCTGACAGCCGCTGCTTACATGTGTCA--GGACTTTCTGTTTGAGCTGGGCGACTTGTTC 4324553 Query 241447 CCGCAGAACGGACGCGGTATTGGACAGTCCTGCGTTGTCAGACTTGAGCACCTTCACTTT 241506 || || || | ||| |||||||| || || ||||||||||| || || || ||||| || Sbjct 4324554 ACGAAGCACAGTCGCTGTATTGGAGAGACCAGCGTTGTCAGATTTCAGAACTTTCACCTT 4324613 Query 241507 CTCCTCCAGCCGCGCGATGCGTTCCAGTTTGCGCCGGCGGCATTTGGTGGCTGCCAAGCG 241566 || ||||| || || ||||| |||||||||||||| ||||||||||| ||||||| ||| Sbjct 4324614 GTCTTCCAGTCGGGCTATGCGCTCCAGTTTGCGCCGACGGCATTTGGTTGCTGCCAGGCG 4324673 Query 241567 GTTCCGGAGTCTCTTACGTTCCGCCTTGATGCGTTCCTGGTCCTCCATGTCGATCGGAGA 241626 ||| | || ||||| || || ||||||||| || |||| |||||||||||||| || Sbjct 4324674 GTTTCTCAGCCTCTTTCGCTCGGCCTTGATGATCTCTTGGTTTTCCATGTCGATCGGGGA 4324733 Query 241627 C-TTGG 241631 | |||| Sbjct 4324734 CATTGG 4324739 >seq23 Length=23871453 Score = 141 bits (156), Expect = 2e-28 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 241414 CAGGACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAG 241473 || ||| | ||||||||| ||||||||||| ||||||| ||||||||||| | ||| Sbjct 22281972 CATGACTTTCTGTTTGAGCTGGGCCACCTGTTCCCGCAAGACGGACGCGGTGGACGCCAG 22281913 Query 241474 TCCTGCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAG 241533 | | ||| | | ||| | ||||||||| ||||||||||| |||| ||| | ||||| Sbjct 22281912 GTCAGAGTTCTGCGTCTTCAACACCTTCACCTTCTCCTCCAGGCGCGAGATCCTCTCCAG 22281853 Query 241534 TTTGCGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTT 241593 || | | ||||||||||| || || | ||||| || ||| | || | |||||||| Sbjct 22281852 CTTCCTCTTGCGGCATTTGGACGCCGCGATCCGGTTGCGCAGTTTTTTCCTCTCCGCCTT 22281793 Query 241594 GATGCGTTCCTGGTCCTCCATGTCGATCGGAGA 241626 ||| | |||||| ||||| |||||| || || Sbjct 22281792 GATCCTCTCCTGGGTCTCCAAGTCGATGGGGGA 22281760 >seq18 Length=26030928 Score = 100 bits (110), Expect = 5e-16 Identities = 94/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 48155 TCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGTTTG 48214 ||||| | ||| |||||| | ||||||||| || |||||||||| ||||| || || Sbjct 19431670 TCGTCTCTGCTAATGAGCTCATTGGAGAAGGTCAGGCCAGGCATGAGCCCCCGCTTCTTC 19431729 Query 48215 AGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAACGCG 48274 ||||||||||| || || || || ||||||||||| || ||||| || || || || ||| Sbjct 19431730 AGCCAGAAAATGGCAGCAAAGGATCCAGAGAAGAAAATCCCCTCAACAGCAGCAAAAGCG 19431789 Score = 91.5 bits (100), Expect = 3e-13 Identities = 67/78 (86%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 |||||| ||||| ||||| ||||| |||||||| ||||| ||||||| |||||||||||| Sbjct 19430536 CTGGTACTCCCCTACTCTCTTCTCGAAGAAGTTGGTCTTGCCCTCCAGCGAGATGTTCTC 19430595 Query 47899 CATGAAGAGGAAGGGGTT 47916 ||||||| ||||| || Sbjct 19430596 CATGAAGTCAAAGGGATT 19430613 >seq7 Length=46052510 Score = 100 bits (110), Expect = 5e-16 Identities = 117/157 (75%), Gaps = 1/157 (1%) Strand=Plus/Minus Query 213807 TCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTC 213866 ||||| |||| ||||||||| ||||| |||| |||||| || |||||| || |||| | Sbjct 17697399 TCTCT-ACTCGCTGCATGAAGAGGTCAGGGATCCACAGAGCATAGAACAGATCTCTGGCC 17697341 Query 213867 CTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGCGTGC 213926 || || ||| || | ||| || |||||| || |||||||| | ||| |||| Sbjct 17697340 CTTTGTTCCTCCTTCCCGGTGTTCTTCTTCAGATCCAGGAAGTCAAACACGTCAAAGTGC 17697281 Query 213927 CACGGCTCCATGTAGATGGCAAAGGCGCCCGGCCTCT 213963 |||||||||| ||| || ||||| || || || |||| Sbjct 17697280 CACGGCTCCAAGTACATAGCAAACGCACCAGGTCTCT 17697244 >seq8 Length=32939842 Score = 89.7 bits (98), Expect = 1e-12 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 241418 ACCTCCTGTTTGAGTTGGGCCACCTGGTCCCGCAGAACGGACGCGGTATTGGACAGTCCT 241477 |||| ||||||||| ||||| || || |||| || | | || || | || | Sbjct 19487737 ACCTTCTGTTTGAGCTGGGCGACTTGTTCCCTCAACATGTTGGCTGTTGAAGCAAGGTCG 19487796 Query 241478 GCGTTGTCAGACTTGAGCACCTTCACTTTCTCCTCCAGCCGCGCGATGCGTTCCAGTTTG 241537 | ||| | || ||| || |||||| || ||||||||||| | |||||| ||||| || Sbjct 19487797 GAGTTCTGAGTCTTCAGGTTCTTCACCTTGTCCTCCAGCCGGGAGATGCGCTCCAGCTTC 19487856 Query 241538 CGCCGGCGGCATTTGGTGGCTGCCAAGCGGTTCCGGAGTCTCTTACGTTCCGCCTTGATG 241597 ||| | ||| || | |||||| | |||||||| | | ||| | || || ||||| Sbjct 19487857 CGCTTCCTGCACTTTGAGGCTGCAACGCGGTTCCTCATGCGCTTCCTCTCGGCTTTGATC 19487916 Query 241598 CGTTCCTGGTCCTCCATGTCGATCGGAGA 241626 | ||||| | ||||||||||| || || Sbjct 19487917 CTCTCCTGATTTTCCATGTCGATAGGGGA 19487945 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931520934600960