Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq7 113 8e-20 seq18 105 1e-17 seq10 84.2 4e-11 >seq7 Length=46052510 Score = 113 bits (124), Expect = 8e-20 Identities = 107/136 (79%), Gaps = 3/136 (2%) Strand=Plus/Minus Query 222020 TTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCT 222079 ||||| ||| || | ||||||||||||||| ||||||||||| || | || |||||| Sbjct 17697403 TTGTTCTCT---ACTCGCTGCATGAAGAGGTCAGGGATCCACAGAGCATAGAACAGATCT 17697347 Query 222080 CTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCA 222139 |||| || || |||||| ||| |||| ||| ||||||||| || ||||| | |||| Sbjct 17697346 CTGGCCCTTTGTTCCTCCTTCCCGGTGTTCTTCTTCAGATCCAGGAAGTCAAACACGTCA 17697287 Query 222140 GCGTGCCACGGCTCCA 222155 |||||||||||||| Sbjct 17697286 AAGTGCCACGGCTCCA 17697271 Score = 86.0 bits (94), Expect = 1e-11 Identities = 103/140 (74%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 221420 AGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAA 221479 |||||||| | |||||| |||||||||||| ||||||| ||| |||||| | Sbjct 17699667 AGGGCAGCATAGTAGATAGTCTCAAAGATCTGAGTGTTGAGCTTCTGGGCCTCTGCGCTC 17699608 Query 221480 GTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATG 221539 || || | ||||| || |||| | |||||||| ||||| || || || |||||| Sbjct 17699607 TCAAACGGAAAACGCATCAGGATAAAGGCATCGGCCAGACCCTGGACACCAATGCCGATG 17699548 Query 221540 GGCCTGTGTCTCCTGTTGGA 221559 |||||||| | | ||||||| Sbjct 17699547 GGCCTGTGGCGCTTGTTGGA 17699528 >seq18 Length=26030928 Score = 105 bits (116), Expect = 1e-17 Identities = 105/136 (77%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932 || ||||| | || || ||||||||||| ||||| || || ||| || || ||||| Sbjct 19431803 GGTGAGCGTGTTGTCGCTTTTGCTGCTGTTGAGGGGATTTTCTTCTCTGGATCCTTTGCT 19431744 Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTC 25992 ||||| |||||||| ||| || |||| |||||| || ||| ||| ||||| |||||| Sbjct 19431743 GCCATTTTCTGGCTGAAGAAGCGGGGGCTCATGCCTGGCCTGACCTTCTCCAATGAGCTC 19431684 Query 25993 ATCAGCAGGGACGAGG 26008 || ||||| ||||||| Sbjct 19431683 ATTAGCAGAGACGAGG 19431668 >seq10 Length=26897606 Score = 84.2 bits (92), Expect = 4e-11 Identities = 100/136 (74%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932 || |||||| | || |||||||| || |||||||| ||||| ||| || || ||||| Sbjct 26346813 GGAGAGCGGTTAGTTGCCTTTGCAGCAGTGGAGGGAATCTTCTTCTCAGGGTCATTTGCT 26346872 Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTC 25992 ||||||| ||| | || ||| || ||||| || || || ||||| |||||| Sbjct 26346873 GCCATCTATTGGTTAAAAAAGAGAGGCCTGATGCCGGGACTCACCTACTCCAATGAGCTC 26346932 Query 25993 ATCAGCAGGGACGAGG 26008 |||||||| || |||| Sbjct 26346933 ATCAGCAGAGATGAGG 26346948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928832968839360