Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq11 150 1e-30 seq1 100 2e-15 >seq11 Length=44859740 Score = 150 bits (166), Expect = 1e-30 Identities = 354/533 (66%), Gaps = 1/533 (0%) Strand=Plus/Plus Query 474332 ATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTA 474391 ||||| |||||| |||| || || ||| ||||| | || | || |||| ||||| Sbjct 43485900 ATTGGCATTGATCTAGGCACCACCTACTCCTGTGTGGGGGTGTTCCAGCATGGCAAAGTG 43485959 Query 474392 GAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAA 474451 || || || ||||| ||||| || || || || ||| | ||||| | ||||| || Sbjct 43485960 GAGATTATCGCCAACGACCAGGGCAACCGACCACGCCCAGC-TATGTGGCCTTTACAGAC 43486018 Query 474452 ACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACT 474511 || || || || |||||||| || || | || | || ||||| ||| || Sbjct 43486019 ACAGAGAGACTCATCGGAGATGCAGCAAAGAACCAGGTAGCGATGAATCCAAATAACACC 43486078 Query 474512 ATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGAT 474571 ||||||||||||| | ||||||| || || ||||||||| | |||||||| ||| Sbjct 43486079 GTTTTTGATGCTAAGCGTCTGATTGGCCGGAAGTTTGATGATTCGGTCGTCCAATCAGAT 43486138 Query 474572 ATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGCAATA 474631 ||| |||||||| || ||||| || | || || || ||||| | | ||| | | Sbjct 43486139 ATGAAGCATTGGCCCTTCAAGGTTATCAGTGACGGAGGAAAACCTAAAGTTCAAGTAGAA 43486198 Query 474632 CACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAA 474691 || ||||||||| ||| || || || | || ||||| ||||| | | || Sbjct 43486199 TACAAAGGTGAAACCAAATCCTTCAACCCAGAGGAGATATCTTCCATGGTCCTGGTAAAG 43486258 Query 474692 ATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACTGTT 474751 ||||| | | || | || || || || | || | | ||||| || ||||| Sbjct 43486259 ATGAAGGAGATTGCTGAAGCCTACCTGGGCCATAAGGTGTCCAACGCAGTCATCACTGTC 43486318 Query 474752 CCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGT 474811 || || || ||||| || || || | || || |||||||| || ||| || ||||| Sbjct 43486319 CCCGCCTACTTTAACGACTCCCAGAGACAGGCCACTAAAGACGCTGGAGTCATAGCAGGA 43486378 Query 474812 CTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGG 474864 | || || | | || |||||||| || || ||||| || |||| || || Sbjct 43486379 TTGAACGTGCTGAGGATCATTAATGAGCCCACGGCAGCAGCCATTGCCTACGG 43486431 Score = 150 bits (166), Expect = 1e-30 Identities = 353/533 (66%), Gaps = 0/533 (0%) Strand=Plus/Plus Query 474332 ATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTA 474391 ||||| |||||| |||| || || ||| ||||| | || | || |||| ||||| Sbjct 43496619 ATTGGCATTGATCTAGGCACCACCTACTCCTGTGTGGGGGTGTTCCAGCATGGCAAAGTG 43496678 Query 474392 GAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAA 474451 || || || ||||| ||||| || || | || || || ||||| | ||||| || Sbjct 43496679 GAGATTATCGCCAACGACCAGGGCAACCGGACCACGCCCAGCTATGTGGCCTTTACAGAC 43496738 Query 474452 ACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACT 474511 || || || || |||||||| || || | || | || ||||| ||| || Sbjct 43496739 ACAGAGAGACTCATCGGAGATGCAGCAAAGAACCAGGTAGCGATGAATCCAAATAACACC 43496798 Query 474512 ATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGAT 474571 ||||||||||||| | ||||||| || || ||||||||| | |||||||| ||| Sbjct 43496799 GTTTTTGATGCTAAGCGTCTGATTGGCCGGAAGTTTGATGATTCGGTCGTCCAATCAGAT 43496858 Query 474572 ATGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGCAATA 474631 ||| |||||||| || ||||| || | || || || ||||| | | ||| | | Sbjct 43496859 ATGAAGCATTGGCCCTTCAAGGTTATCAGTGACGGAGGAAAACCTAAAGTTCAAGTAGAA 43496918 Query 474632 CACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAA 474691 || ||||||||| ||| || || || | || ||||| ||||| | | || Sbjct 43496919 TACAAAGGTGAAACCAAATCCTTCAACCCAGAGGAGATATCTTCCATGGTCCTGGTAAAG 43496978 Query 474692 ATGAAACAAACCGCGAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACTGTT 474751 ||||| | | || | || || || || | || | | ||||| || ||||| Sbjct 43496979 ATGAAGGAGATTGCTGAAGCCTACCTGGGCCATAAGGTGTCCAACGCAGTCATCACTGTC 43497038 Query 474752 CCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGT 474811 || || || ||||| || || || | || || |||||||| || ||| || ||||| Sbjct 43497039 CCCGCCTACTTTAACGACTCCCAGAGACAGGCCACTAAAGACGCTGGAGTCATAGCAGGA 43497098 Query 474812 CTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGG 474864 | || || | | || |||||||| || || ||||| || |||| || || Sbjct 43497099 TTGAACGTGCTGAGGATCATTAATGAGCCCACGGCAGCAGCCATTGCCTACGG 43497151 Score = 113 bits (124), Expect = 3e-19 Identities = 403/623 (65%), Gaps = 6/623 (1%) Strand=Plus/Plus Query 475547 GTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATT-ACAAGGGCTAA 475605 ||||| | || ||| | || || || ||||| | | || || | | || ||||| Sbjct 43497444 GTTGAGATCGACTCTYTGTTCGAGGGCATTGACTTCTACAC-CTCAGTCACCAGGGCCCG 43497502 Query 475606 ATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTTCT 475665 ||||| || || ||||| ||||||||||| ||| | || || || || ||| || Sbjct 43497503 TTTTGAGGAGATGTGTTCAGATCTCTTTAGGGGAACCCTGGAGCCTGTGGAGAAAGCCCT 43497562 Query 475666 CAGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTCAAC 475725 || ||| | || | ||||| || || || |||| ||||| || || ||||| || || Sbjct 43497563 AAGGGATGCCAAGATGGACAAGTCCCACATCAATGATATTGTCCTGGTTGGAGGCTCCAC 43497622 Query 475726 AAGAATTCCAAAAATAAGAGAAATGCTTTCATCA-TATTTTAATGGTAAAAAGTTAAATG 475784 | || || ||| | |||| | | || | | ||| || || | | | |||| Sbjct 43497623 CCGGATCCCCAAAGT-CCAGAAGCTCCTGCAGGACTTTTTCAACGGCAGAGAACTAAACA 43497681 Query 475785 AAAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTAT 475844 | || | || || ||||| || ||||| || || |||||||| || || || ||||| | Sbjct 43497682 AGAGCATCAACCCAGATGAGGCAGTTGCCTACGGTGCTGCTGTACAGGCGGCCATTTTGT 43497741 Query 475845 CAGGTCAATCAGAC-GAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTTTCA 475903 | ||| | || | ||||| | | | | || | | ||||| |||| || || Sbjct 43497742 CTGGT-GACAAGTCTGAGAATGTCCAGGACCTGCTATTGCTGGACGTGGCTCCTCTGTCC 43497800 Query 475904 TTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATC 475963 | || | || || | |||||| | |||||| ||| || | | || ||| | || Sbjct 43497801 CTGGGCATCGAGACCGCCGGAGGGGTCATGACTGCTCTGATCAAACGCAACACTACAATT 43497860 Query 475964 CCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATC 476023 |||| |||| | | | | || | || ||| |||| || ||| | || ||| Sbjct 43497861 CCATCCAAACAGACCCAGATCTTCACTACCTATGCTGACAACCAACCTGGCGTCCTGATC 43497920 Query 476024 CAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAAT 476083 || | ||||| || || ||| | || || ||||| ||| || || | ||| | Sbjct 43497921 CAGGTTTTTGAGGGAGAGAGAGCCATGACCAAGGATAACAACCTTCTGGGGAAGTTTGAG 43497980 Query 476084 CTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATT 476143 || || || || ||||| || | ||||| ||||| || || || |||||||| || Sbjct 43497981 CTCTCCGGGATCCCCCCTGCCCCACGTGGAGTCCCTCAGATCGAGGTGACTTTTGACATC 43498040 Query 476144 GATGCAAATGGTATTCTTAATGT 476166 ||||| ||||| ||||| || || Sbjct 43498041 GATGCCAATGGAATTCTAAACGT 43498063 >seq1 Length=40371802 Score = 100 bits (110), Expect = 2e-15 Identities = 111/148 (75%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 474729 TAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTA 474788 ||||| ||||||| || ||||| ||||| || || ||||||||||| || || || || | Sbjct 22274862 TAACTAATGCAGTGATCACTGTGCCAGCTTACTTCAATGATTCTCAGCGCCAGGCCACCA 22274803 Query 474789 AAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAG 474848 |||| || || | || |||| || || || |||| || || ||||| ||||| || | Sbjct 22274802 AAGACGCAGGGACCATCTCAGGACTCAACGTACTACGCATCATCAATGAGCCAACTGCTG 22274743 Query 474849 CCGCACTTGCTTATGGTCTTGATAAGAA 474876 | || |||| ||||| || || ||||| Sbjct 22274742 CTGCTATTGCCTATGGCCTGGACAAGAA 22274715 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268135490145812