Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq14 104 2e-17 seq7 96.9 3e-15 >seq14 Length=34043612 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || || ||||| || || || || || || || ||| Sbjct 21660202 ATGCAGATCTTTGTGAAGACCCTGACTGGTAAGACCATCACCCT-GAGGTTGAGCCCAGT 21660260 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| | ||| || || || || || Sbjct 21660261 GACACCATCGAGAATGTCAAGGCCAAGATCCAGGACAAGGGAGGCATCCCCCCAGACCAG 21660320 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGG-AGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| ||||||| ||||| |||||||||| | ||| | | | | || || || || Sbjct 21660321 CAGCGTCTGATCTTCGCCGGCAAACAGCTGGAAAGATGGTCGCACCCTCTCCGACTACAA 21660380 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 ||| || ||||| || || || ||| ||||| | || || | |||||| Sbjct 21660381 CATCCAGAAGGAGTCCACCCTTCACCTGGTGCTCCGTCTGAGGGGAGGC 21660429 Score = 100 bits (110), Expect = 3e-16 Identities = 162/229 (71%), Gaps = 3/229 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || || ||||| || || || || || || || ||| Sbjct 21660430 ATGCAGATCTTTGTGAAGACCCTGACTGGTAAGACCATCACCCT-GAGGTTGAGCCCAGT 21660488 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || || | ||| |||||||| ||||| || || || || || || || Sbjct 21660489 GACACCATCGAGAATGTCAAAGGCCAAGATCCAGGACAAGGAGGGCAT-CCCCCAGACCA 21660547 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| ||||||| ||||| || |||||||| ||| | | | | || || || || Sbjct 21660548 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAAGATGGTCGCACCCTCTCCGACTACAA 21660607 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 ||| || ||||| || || || ||| ||||| | || || | |||||| Sbjct 21660608 CATCCAGAAGGAGTCCACCCTTCACCTGGTGCTCCGTCTGAGGGGAGGC 21660656 Score = 100 bits (110), Expect = 3e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | || || || || ||||| || || || || || | || ||| Sbjct 21660657 ATGCAGATCTTTGTGAAGACCCTGACTGGTAAGACCATCACCCTGGAGGGTGAGCCCAGT 21660716 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| |||||| || || || || || || || Sbjct 21660717 GACACCATCGAGAATGTCAAGGCAAAGATCC-AGACAAGGAGGGCATCCCCCCAGACCAG 21660775 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTA-TAA 24882 || ||| ||||||| ||||| || |||||||| ||| | | | | || || || || Sbjct 21660776 CAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAAGATGGTCGCACCCTCTCCGACTACAAA 21660835 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931 ||| || ||||| || || || ||| ||||| | || || | |||||| Sbjct 21660836 CATCCAGAAGGAGTCCACCCTTCACCTGGTGCTCCGTCTGAGGGGAGGC 21660884 Score = 96.9 bits (106), Expect = 3e-15 Identities = 150/212 (71%), Gaps = 3/212 (1%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 ||||||||||||| | || || || || || || || || || || || || || ||| Sbjct 21659977 GATGCAGATCTTTGTAAAGACCCTGACTGGCAAGACCATCACCCTGGAGGTTGAGCCCAG 21660036 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || | || || |||| ||||| ||||| || || || || || || || Sbjct 21660037 TGACACCATCGAGAATGTCAAGCAAA--ATCCAGGACAAGGAGGGCATCCCCCCAGACCA 21660094 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| ||||||| ||||| || |||||||| ||| | | | | || || || || Sbjct 21660095 GCAGCGTCTGATCTTCGCCGGCAAGCAGCTGGAAGATGGTCGCACCCTCTCCGACTACAA 21660154 Query 24883 CATTCAAAAGGAAT-CGACACTACACTTGGTG 24913 ||| || ||||| | | || || ||| ||||| Sbjct 21660155 CATCCAGAAGGAGTCCCACCCTTCACCTGGTG 21660186 >seq7 Length=46052510 Score = 96.9 bits (106), Expect = 3e-15 Identities = 153/218 (70%), Gaps = 1/218 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||||||||| | || || || || || || || || || ||||| || || | | Sbjct 22020060 GATGCAGATCTTCGTGAAGACCCTCACAGGCAAGACCATCACCCTCGAGGTCGAGCCAAG 22020119 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGAT-CCAAGACAAAGAAGGAATACCTCCCGATC 24821 |||||| | || | || || ||||| ||| ||||| || || || || || || | Sbjct 22020120 CGACACCATTGAGAATGTGAAGGCCAAGATGCCAGGACAAGGAGGGCATTCCCCCAGACC 22020179 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881 | || ||| ||||||||||||| || |||||||| ||| | | | | || || || | Sbjct 22020180 AGCAGCGTCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTTTCCGACTACA 22020239 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCGA 24919 |||| || || ||||| || || || ||||| | ||| Sbjct 22020240 ACATCCAGAAAGAATCCACCCTTCATCTGGTGCTCCGA 22020277 Score = 93.3 bits (102), Expect = 4e-14 Identities = 151/216 (70%), Gaps = 1/216 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || || || ||||| || || | | | Sbjct 22020290 ATGCAGATCTTCGTGAAGACCCTCACAGGCAAGACCATCACCCTCGAGGTCGAGCCAAGC 22020349 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 22020350 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCAG 22020409 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || ||| ||||||||| ||| || |||||||| ||| | | | | || || || ||| Sbjct 22020410 CAGCGTCTGATCTTTG-CGGCAAGCAGCTGGAAGATGGCCGCACCCTTTCCGACTACAAC 22020468 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGA 24919 || || || || || || || ||| ||||| | ||| Sbjct 22020469 ATCCAGAAAGAGTCCACCCTTCACCTGGTGCTCCGA 22020504 Score = 87.8 bits (96), Expect = 2e-12 Identities = 151/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || || || ||||| || || | | | Sbjct 22020517 ATGCAGATCTTCGTGAAGACCCTCACAGGCAAGACCATCACCCTCGAGGTCGAGCCAAGC 22020576 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGA-TCA 24822 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 22020577 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACCCA 22020636 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| ||||||||||||| || |||||||| ||| | | | || || || || Sbjct 22020637 GCAGCGTCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCTCTTCCGACTACAA 22020696 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGA 24919 ||| || || ||||| || || || ||||| | ||| Sbjct 22020697 CATCCAGAAAGAATCCACCCT-CATCTGGTGCTCCGA 22020732 Score = 87.8 bits (96), Expect = 2e-12 Identities = 151/217 (70%), Gaps = 2/217 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | | | | || || || || || || || ||||| || || | | | Sbjct 22020745 ATGCAGATCTTCGTGAGACC-CTCACAGGCAAGACCATCACCCTCGAGGTCGAGCCAAGC 22020803 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGAT-CA 24822 ||||| | || | || || |||||||| ||||| || || || || || || || Sbjct 22020804 GACACCATTGAGAATGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCCCCAGACGCA 22020863 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || ||| ||||||||||||| || |||||||| ||| | | | | || || || || Sbjct 22020864 GCAGCGTCTGATCTTTGCCGGCAAGCAGCTGGAAGATGGCCGCACCCTTTCCGACTACAA 22020923 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGA 24919 ||| || || ||||| || || || ||||| | ||| Sbjct 22020924 CATCCAGAAAGAATCCACCCTTCATCTGGTGCTCCGA 22020960 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449891869429320