Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq7 111 1e-19 >seq7 Length=46052510 Score = 111 bits (122), Expect = 1e-19 Identities = 164/231 (71%), Gaps = 1/231 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || ||||| | || ||||||| |||||| ||||||||||| || ||||| || || | | Sbjct 22020288 CCGCCCCTGAGTCGGAGCACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAA 22020229 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | |||||| ||| || || || ||||| ||| | |||| | ||||| || || ||| Sbjct 22020228 AGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTGGGGGA 22020169 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTG-TTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || ||||| ||||| || || || | || ||| | || | ||||| | || || Sbjct 22020168 ATGCCCTCCTTGTCCTGGCATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCTCGAC 22020109 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 || || || || || ||||| || | ||| || || || |||||||| || Sbjct 22020108 CTCGAGGGTGATGGTCTTGCCTGTGAGGGTCTTCACGAAGATCTGCATCTT 22020058 Score = 89.7 bits (98), Expect = 4e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || ||||| | || ||||||| |||||| ||||||||||| || ||||| || || | | Sbjct 22020971 CCGCCCCTGAGTCGGAGCACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAA 22020912 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTG-ATCCGGCGG 29678 | |||||| ||| || || || ||||| ||| | |||| | ||||| || || || Sbjct 22020911 AGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGCGTCTGGGGG 22020852 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || ||||| ||||| || | || || ||| | || | ||||| | || || Sbjct 22020851 GATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCTCGAC 22020792 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || ||||| | | ||| | | || || |||||||| Sbjct 22020791 CTCGAGGGTGATGGTCTTGCCTG-TGAGGGTCTCACGAAGATCTGCAT 22020745 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || ||||| | || ||||||| |||| | ||||||||||| || ||||| || || | | Sbjct 22020743 CCGCCCCTGAGTCGGAGCACCAGATGAGG-GTGGATTCTTTCTGGATGTTGTAGTCGGAA 22020685 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCT-GATCCGGCGG 29678 |||||| ||| || || || ||||| ||| | |||| | |||| | || || || Sbjct 22020684 GAGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGGTCTGGGGG 22020625 Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTAC 29738 || ||||| ||||| || | || || ||| | || | ||||| | || || Sbjct 22020624 GATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCTCGAC 22020565 Query 29739 TTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || || || || || ||||| || | ||| || || || |||||||| Sbjct 22020564 CTCGAGGGTGATGGTCTTGCCTGTGAGGGTCTTCACGAAGATCTGCAT 22020517 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385214415938679