Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq14 114 3e-20 seq7 109 1e-18 seq8 89.7 1e-12 seq3 84.2 4e-11 >seq14 Length=34043612 Score = 114 bits (126), Expect = 3e-20 Identities = 161/222 (73%), Gaps = 3/222 (1%) Strand=Plus/Minus Query 82590 CTCAAACGCAGAACTAAGTGCAGAGTAG-ATTCTTTCTGTATATTATAATCAGATAGAAT 82648 |||| ||| || || | ||| || || | | || ||||| || || || || || || | Sbjct 21660197 CTCAGACGGAGCACCAGGTGAAGGGTGGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGT 21660138 Query 82649 TCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCC 82708 | ||| ||||| || || || || || ||||| || | || || ||||| || || || Sbjct 21660137 GCGACCATCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATGCC 21660078 Query 82709 TTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAA 82768 ||||| || || || ||||||| ||||| || || || ||| | || || || |||| Sbjct 21660077 CTCCTTGTCCTGGAT-TTTGCTTG-ACATTCTCGATGGTGTCACTGGGCTCAACCTCCAG 21660020 Query 82769 AGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || |||||||| |||| ||||||||||| |||||||| Sbjct 21660019 GGTGATGGTCTTGCCAGTCAGGGTCTTTACAAAGATCTGCAT 21659978 >seq7 Length=46052510 Score = 109 bits (120), Expect = 1e-18 Identities = 154/215 (72%), Gaps = 1/215 (0%) Strand=Plus/Minus Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655 || || || | ||| || || || |||||||| || || || || || || | | || Sbjct 22020503 CGGAGCACCAGGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCA 22020444 Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715 ||||| || || || || |||||||| || | || || ||||| || || || ||||| Sbjct 22020443 TCTTCCAGCTGCTTGCC-GCAAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTG 22020385 Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775 || || ||||| || || ||||| ||||| || || | || || || || | || || Sbjct 22020384 TCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCTCGACCTCGAGGGTGATG 22020325 Query 82776 GTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 ||||||||||| | ||||| || || |||||||| Sbjct 22020324 GTCTTGCCTGTGAGGGTCTTCACGAAGATCTGCAT 22020290 Score = 107 bits (118), Expect = 4e-18 Identities = 147/204 (72%), Gaps = 1/204 (0%) Strand=Plus/Minus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || || || ||||||||||| || || || || || || | | || ||||| || || Sbjct 22020264 TGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCTTCCAGCTGC 22020205 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTAT-CTTGAATCTT 82726 || || |||||||| || | || || ||||| || || || ||||| | || | ||||| Sbjct 22020204 TTGCCGGCAAAGATCAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGCATCTT 22020145 Query 82727 TGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGT 82786 || || ||||| ||||| || || | || || || || | || || ||||||||||| Sbjct 22020144 GGCCTTCACATTCTCAATGGTGTCGCTTGGCTCGACCTCGAGGGTGATGGTCTTGCCTGT 22020085 Query 82787 CAACGTCTTTACAAATATCTGCAT 82810 | ||||| || || |||||||| Sbjct 22020084 GAGGGTCTTCACGAAGATCTGCAT 22020061 Score = 102 bits (112), Expect = 2e-16 Identities = 146/202 (72%), Gaps = 3/202 (1%) Strand=Plus/Minus Query 82611 AGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATT-CTACCGTCTTCTAGTTGTTT 82669 || || ||||||||||| || || || || || ||| | | || ||||| || || || Sbjct 22020717 AGGGTGGATTCTTTCTGGATGTTGTAGTCGGA-AGAGGTGCGGCCATCTTCCAGCTGCTT 22020659 Query 82670 TCCAGCAAAGATTAGTCTTTGTTGA-TCTGGAGGTATTCCTTCCTTATCTTGAATCTTTG 82728 || |||||||| || | || || ||||| || || || ||||| || || ||||| | Sbjct 22020658 GCCGGCAAAGATCAGACGCTGCTGGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGG 22020599 Query 82729 CTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGTCA 82788 | || ||||| ||||| || || | || || || || | || || ||||||||||| | Sbjct 22020598 CCTTCACATTCTCAATGGTGTCGCTTGGCTCGACCTCGAGGGTGATGGTCTTGCCTGTGA 22020539 Query 82789 ACGTCTTTACAAATATCTGCAT 82810 ||||| || || |||||||| Sbjct 22020538 GGGTCTTCACGAAGATCTGCAT 22020517 Score = 100 bits (110), Expect = 6e-16 Identities = 146/204 (72%), Gaps = 2/204 (1%) Strand=Plus/Minus Query 82608 TGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTGT 82667 || || || ||||||||||| || || || || || || | | || ||||| || || Sbjct 22020947 TGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCTTCCAGCTGC 22020888 Query 82668 TTTCCAGCAAAGATTAGTCTTTGTTGA-TCTGGAGGTATTCCTTCCTTATCTTGAATCTT 82726 || || |||||||| || | || || ||||| || || || ||||| || || ||||| Sbjct 22020887 TTGCCGGCAAAGATCAGACGCTGCTGCGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTT 22020828 Query 82727 TGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGT 82786 || || ||||| ||||| || || | || || || || | || || ||||||||||| Sbjct 22020827 GGCCTTCACATTCTCAATGGTGTCGCTTGGCTCGACCTCGAGGGTGATGGTCTTGCCTGT 22020768 Query 82787 CAACGTCTTTACAAATATCTGCAT 82810 | ||| | || || |||||||| Sbjct 22020767 GAGGGTC-TCACGAAGATCTGCAT 22020745 >seq8 Length=32939842 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 82707 CCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCC 82766 ||||||||||| || ||||| || || |||||||| || ||||| | || ||||| || Sbjct 3064556 CCTTCCTTATCCTGGATCTTAGCCTTGACATTTTCGATGGTATCGCTGGGCTCTACCTCA 3064497 Query 82767 AAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | || || || || || |||||||||||||| || |||||||| Sbjct 3064496 AGGGTGATGGTTTTCCCCGTCAACGTCTTTACGAAGATCTGCAT 3064453 >seq3 Length=29826154 Score = 84.2 bits (92), Expect = 4e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 82707 CCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCC 82766 ||||| |||||||||||||| ||||| ||||| || || || ||| | ||||| || || Sbjct 7134719 CCTTCTTTATCTTGAATCTTGGCTTTCACATTCTCGATAGTGTCACTGGGTTCCACCTCA 7134660 Query 82767 AAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | || || || || || ||||| || || ||||| |||||||| Sbjct 7134659 AGTGTGATGGTTTTACCAGTCAAGGTTTTCACAAAGATCTGCAT 7134616 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981814381325441