Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq14 136 4e-27 seq7 134 1e-26 >seq14 Length=34043612 Score = 136 bits (150), Expect = 4e-27 Identities = 150/196 (77%), Gaps = 4/196 (2%) Strand=Plus/Minus Query 133466 GGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCCCG 133524 |||||| ||||| || ||||| ||| | ||| ||| | || || ||||||||||| | Sbjct 21660170 GGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCA-TCTTCCAGCTGCTTGCCGG 21660112 Query 133525 CGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTGA 133584 || | || || ||||||||||| || |||||||| |||||||| || |||||||||| Sbjct 21660111 CGAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGA--TTTTGCTTGA 21660054 Query 133585 GCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTTT 133644 | ||| | ||||| ||||||| || || | ||||| ||| ||||| ||||| || | Sbjct 21660053 CATTCTCGATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCT 21659994 Query 133645 TTACGAAAATCTGCAT 133660 |||| || |||||||| Sbjct 21659993 TTACAAAGATCTGCAT 21659978 Score = 129 bits (142), Expect = 6e-25 Identities = 154/204 (75%), Gaps = 4/204 (2%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATT-GTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTG 133520 ||||||||| ||||| || || ||| ||| | ||| ||| | || || ||||||||| Sbjct 21660854 GGTGGACTCCTTCTGGATGTTTGTAGTCGGAGAGGGTGCGACCA-TCTTCCAGCTGCTTG 21660796 Query 133521 CCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580 || ||| | || || ||||||||||| || |||||||| |||||||| | ||||||| | Sbjct 21660795 CCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCTG-GATCTTTGCC 21660737 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 |||| | ||| | ||||| ||||||| | || | ||||| ||| || || ||||| Sbjct 21660736 TTGACATTCTCGATGGTGTCACTGGGCTCACCCTCCAGGGTGATGGTCTTACCAGTCAGG 21660677 Query 133641 GTTTTTACGAAAATCTGCATGGCT 133664 || || || || ||||||||| || Sbjct 21660676 GTCTTCACAAAGATCTGCATGCCT 21660653 Score = 120 bits (132), Expect = 3e-22 Identities = 148/200 (74%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| ||| | ||| ||| | || ||||| |||| Sbjct 21660399 GGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCTTTCCAGCTGTTTGC 21660340 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | ||| | || || ||||||||||| || ||||||||| ||||||| |||||| || Sbjct 21660339 CGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATGCCTCCCTTGTCCTGGATCTTGGCCT 21660280 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | ||| | ||||| ||||||| || || | ||||| ||| || || ||||| | Sbjct 21660279 TGACATTCTCGATGGTGTCACTGGGCTCAACCTC-AGGGTGATGGTCTTACCAGTCAGGG 21660221 Query 133642 TTTTTACGAAAATCTGCATG 133661 | || || || ||||||||| Sbjct 21660220 TCTTCACAAAGATCTGCATG 21660201 Score = 120 bits (132), Expect = 3e-22 Identities = 153/204 (75%), Gaps = 5/204 (2%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| ||| | ||| ||| | || || |||||||||| Sbjct 21660626 GGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCA-TCTTCCAGCTGCTTGC 21660568 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC- 133580 | ||| | || || ||||||||||| || |||||||| |||||||| |||||| | Sbjct 21660567 CGGCGAAGATCAGACGCTGCTGGTCTGG-GGGATGCCCTCCTTGTCCTGGATCTTGGCCT 21660509 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 |||| | ||| | ||||| ||||||| || || | ||||| ||| || || ||||| Sbjct 21660508 TTGACATTCTCGATGGTGTCACTGGGCTCAACCTC-AGGGTGATGGTCTTACCAGTCAGG 21660450 Query 133641 GTTTTTACGAAAATCTGCATGGCT 133664 || || || || ||||||||| || Sbjct 21660449 GTCTTCACAAAGATCTGCATGCCT 21660426 >seq7 Length=46052510 Score = 134 bits (148), Expect = 1e-26 Identities = 152/200 (76%), Gaps = 3/200 (2%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||||||||| || ||||| ||| | ||| | | | || || |||||||||| Sbjct 22020486 GGTGGACTCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCA-TCTTCCAGCTGCTTGC 22020428 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || || ||||||||||| || |||||||| |||||||| |||||| || Sbjct 22020427 C-GCAAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCT 22020369 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | ||||| |||||| | ||||| || |||| ||||| ||| ||||| || || | Sbjct 22020368 TCACATTCTCAATGGTGTCGCTTGGCTCGACCTCGAGGGTGATGGTCTTGCCTGTGAGGG 22020309 Query 133642 TTTTTACGAAAATCTGCATG 133661 | || ||||| ||||||||| Sbjct 22020308 TCTTCACGAAGATCTGCATG 22020289 Score = 122 bits (134), Expect = 8e-23 Identities = 153/206 (74%), Gaps = 3/206 (1%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | |||||| |||||||| || ||||| ||| | ||| | | | || || |||| Sbjct 22020265 ATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCA-TCTTCCAGCT 22020207 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGT-CGGTGATC 133574 ||||||| || | || || ||||||||||| || || ||||| ||||||| | | ||| Sbjct 22020206 GCTTGCCGGCAAAGATCAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGCATC 22020147 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||| | | ||||| |||||| | ||||| || |||| ||||| ||| ||||| Sbjct 22020146 TTGGCCTTCACATTCTCAATGGTGTCGCTTGGCTCGACCTCGAGGGTGATGGTCTTGCCT 22020087 Query 133635 GTCAGAGTTTTTACGAAAATCTGCAT 133660 || || || || ||||| |||||||| Sbjct 22020086 GTGAGGGTCTTCACGAAGATCTGCAT 22020061 Score = 122 bits (134), Expect = 8e-23 Identities = 150/201 (75%), Gaps = 3/201 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 |||||| |||||||| || ||||| ||| ||| | | | || || |||||||||| Sbjct 22020715 GGTGGATTCTTTCTGGATGTTGTAGTCGGAAGAGGTGCGGCCA-TCTTCCAGCTGCTTGC 22020657 Query 133522 CCGCGTAAATGAGCCGCTGCT-GGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGC 133580 | || | || || ||||||| |||| || |||||||| |||||||| |||||| | Sbjct 22020656 CGGCAAAGATCAGACGCTGCTGGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCC 22020597 Query 133581 TTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGA 133640 || | | ||||| |||||| | ||||| || |||| ||||| ||| ||||| || || Sbjct 22020596 TTCACATTCTCAATGGTGTCGCTTGGCTCGACCTCGAGGGTGATGGTCTTGCCTGTGAGG 22020537 Query 133641 GTTTTTACGAAAATCTGCATG 133661 || || ||||| ||||||||| Sbjct 22020536 GTCTTCACGAAGATCTGCATG 22020516 Score = 120 bits (132), Expect = 3e-22 Identities = 154/207 (74%), Gaps = 4/207 (2%) Strand=Plus/Minus Query 133457 ATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCT 133515 ||| | |||||| |||||||| || ||||| ||| | ||| | | | || || |||| Sbjct 22020948 ATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCA-TCTTCCAGCT 22020890 Query 133516 GCTTGCCCGCGTAAATGAGCCGCTGCTG-GTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||||| || | || || |||||||| ||| || |||||||| |||||||| |||| Sbjct 22020889 GCTTGCCGGCAAAGATCAGACGCTGCTGCGTCTGGGGGGATGCCCTCCTTGTCCTGGATC 22020830 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||| | | ||||| |||||| | ||||| || |||| ||||| ||| ||||| Sbjct 22020829 TTGGCCTTCACATTCTCAATGGTGTCGCTTGGCTCGACCTCGAGGGTGATGGTCTTGCCT 22020770 Query 133635 GTCAGAGTTTTTACGAAAATCTGCATG 133661 || || | | | ||||| ||||||||| Sbjct 22020769 GTGAG-GGTCTCACGAAGATCTGCATG 22020744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483414642427560