Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_024696.1 Length=180800 Score E Sequences producing significant alignments: (Bits) Value seq374 122 1e-22 >seq374 Length=1031121 Score = 122 bits (134), Expect = 1e-22 Identities = 349/529 (66%), Gaps = 21/529 (4%) Strand=Plus/Plus Query 176946 GCCAGTTCTATAGGGGACGTGTAGTCGTTCACGTGAATGAAAGCGTCTCCCGGGACGTAA 177005 ||||||||| | || || || |||| | ||| || || || || || ||| |||| | Sbjct 107685 GCCAGTTCTTTGGGTGAAGTAAAGTCATCCACATGGATAAAGGCATCACCCTGGACAAAG 107744 Query 177006 TTTTCGTAATTCTCTCTCGATGTTCCGAGTACTATGGGTACCGCACCTGCCATAAGAGAT 177065 |||||||| |||| ||| | || || | || | || || | ||| | || | Sbjct 107745 TTTTCGTAGTTCTGTCTTGGTGGGCCTAACACCACAGGCACTGTCCCTACAGACAGTGGG 107804 Query 177066 CGGTAGAGTTTTTCGGTAATATAGTCCCTGTGTACGGAGTTCTCAAACGCGAGATAGAAT 177125 ||| ||||| || || || ||||| |||| | |||||||||||||| | |||||| Sbjct 107805 TTGTACAGTTTCTCTGTGATGTAGTCTTTGTGAATTGAGTTCTCAAACGCCAAGTAGAAT 107864 Query 177126 TTACA--GGAAGATAGTAGCGGGATGAAGTCATCATCGGGTATATAATCTCCTACTACGT 177183 ||||| | ||| ||| |||| | |||| | ||| | || || || || | | | Sbjct 107865 TTACAACTGCTGATGGTA--GGGAAGTAGTCTTGATCTGCAATGTACTCCCCAAAAGCTT 107922 Query 177184 TCCCGTATACATGTATATCTATGTGTTTACTGAGCTCTAGGTAGTATCTCGATCTCACGT 177243 ||| | |||| | || |||||||| |||||| |||||| || || ||| | Sbjct 107923 GTCCGAAAGCATGAACCTCAATGTGTTTGTAGAGCTCATTGTAGTACTTCACTCGCACAT 107982 Query 177244 GGTCGTTGTTCCAATTGCTGACGACCCAGCAAACTAACTTGCTCTTTGCGGGAACGGGAT 177303 | || |||||| |||||||| | |||||| | |||||||| ||||| ||| Sbjct 107983 GATCTGGGTTCCAGTTGCTGACAATCCAGCAGATCAACTTGCT-TTTGC----TCGG--- 108034 Query 177304 TCGATACTAATGCAGTGTCTCT--GAGCGTT---AGTGATCCATAGGGCACGTGAATATC 177358 | | ||| | | | ||| || |||| | || ||||| ||||| | |||||| Sbjct 108035 TGGCACAAAATCCTTTATATCTTGGACCGTTACAATCGACCCATAAGGCACTTCAATATC 108094 Query 177359 CGAGTCGCGTCTGTACGTTAACGTGAGATTGAAAAGGTTTTCTATACCTTG--TTTGAAG 177416 | || | | || | || || | |||||| | ||| || ||||| | |||| Sbjct 108095 AGCATCCTGACGATAATTCAAAGTTAAATTGAACAAGTTCTCAATACCAGGCAGTTGAGA 108154 Query 177417 GGGCTGTTACTGGGCGATTCTAAGTTCATCCATATCCACTTTTGAAAGG 177465 || || || || || || | |||||||||||||||||| || |||| Sbjct 108155 GGAATGGGAC--GGTGACTCGAGGTTCATCCATATCCACTTCTGGAAGG 108201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578424632222400