Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq7 109 4e-19 seq14 100 2e-16 >seq7 Length=46052510 Score = 109 bits (120), Expect = 4e-19 Identities = 155/213 (73%), Gaps = 5/213 (2%) Strand=Plus/Minus Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 ||||| ||| || ||| ||||| || |||||||| ||||| || ||||| | || || Sbjct 22020271 CACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCTTC 22020212 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTC--G 33657 || || || |||||||| |||| ||||||||| ||| | || | || || ||||| | Sbjct 22020211 CAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTG 22020152 Query 33658 GCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCACGTCAACCGTGATCGT 33716 ||| | || |||| ||| ||| ||||||||||| || || || | ||||| || Sbjct 22020151 GCA-TCTTGGCCTTCA-CATTCTCAATGGTGTCGCTTGGCTCGACCTCGAGGGTGATGGT 22020094 Query 33717 TTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || ||||| | || || || ||||||||||| Sbjct 22020093 CTTGCCTGTGAGGGTCTTCACGAAGATCTGCAT 22020061 Score = 100 bits (110), Expect = 2e-16 Identities = 151/211 (72%), Gaps = 3/211 (1%) Strand=Plus/Minus Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 ||||| || || ||| |||||| || |||||||| ||||| || ||||| | || || Sbjct 22020498 CACCAGGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCTTC 22020439 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGC 33659 || || || ||| |||| |||| ||||||||| ||| | || | || || ||||| Sbjct 22020438 CAGCTGCTTGCCG-CAAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTG 22020380 Query 33660 AATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCACGTCAACCGTGATCGTTT 33718 || || |||| ||| ||| ||||||||||| || || || | ||||| || | Sbjct 22020379 GATCTTGGCCTTCA-CATTCTCAATGGTGTCGCTTGGCTCGACCTCGAGGGTGATGGTCT 22020321 Query 33719 TACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | ||||| | || || || ||||||||||| Sbjct 22020320 TGCCTGTGAGGGTCTTCACGAAGATCTGCAT 22020290 Score = 93.3 bits (102), Expect = 3e-14 Identities = 153/213 (72%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA-GAGTGTGCGTTCGTCGT 33598 ||||| ||| || ||| ||||| || |||||||| ||||| ||| ||||| | || | Sbjct 22020726 CACCAGATG-AGGGTGGATTCTTTCTGGATGTTGTAGTCGGAAGAG-GTGCGGCCATCTT 22020669 Query 33599 CCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGA-TCTTGCGGCACACCTTCTTTGTCG 33657 ||| || || |||||||| |||| ||||||||| ||| | || | || || ||||| Sbjct 22020668 CCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGGTCTGGGGGGATGCCCTCCTTGTCC 22020609 Query 33658 GCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCACGTCAACCGTGATCGT 33716 || || |||| ||| ||| ||||||||||| || || || | ||||| || Sbjct 22020608 TGGATCTTGGCCTTCA-CATTCTCAATGGTGTCGCTTGGCTCGACCTCGAGGGTGATGGT 22020550 Query 33717 TTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || ||||| | || || || ||||||||||| Sbjct 22020549 CTTGCCTGTGAGGGTCTTCACGAAGATCTGCAT 22020517 Score = 93.3 bits (102), Expect = 3e-14 Identities = 151/212 (71%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 33540 CACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTC 33599 ||||| ||| || ||| ||||| || |||||||| ||||| || ||||| | || || Sbjct 22020954 CACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCTTC 22020895 Query 33600 CAATTGTTTTCCGGCAAAAATCAAACGCTGCTGA-TCTTGCGGCACACCTTCTTTGTCGG 33658 || || || |||||||| |||| ||||||||| ||| | || | || || ||||| Sbjct 22020894 CAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGCGTCTGGGGGGATGCCCTCCTTGTCCT 22020835 Query 33659 CAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCACGTCAACCGTGATCGTT 33717 || || |||| ||| ||| ||||||||||| || || || | ||||| || Sbjct 22020834 GGATCTTGGCCTTCA-CATTCTCAATGGTGTCGCTTGGCTCGACCTCGAGGGTGATGGTC 22020776 Query 33718 TTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || |||| | | | | | || ||||||||||| Sbjct 22020775 TTGCCTG-TGAGGGTCTCACGAAGATCTGCAT 22020745 >seq14 Length=34043612 Score = 100 bits (110), Expect = 2e-16 Identities = 159/223 (71%), Gaps = 5/223 (2%) Strand=Plus/Minus Query 33529 CTCAAACGTAACACCAAATGTAGAGTGCT-CTCTTTTTGTATGTTGTAATCGGAGAGTGT 33587 |||| ||| | ||||| || || ||| ||| || || |||||||| |||||||| || Sbjct 21660197 CTCAGACGGAGCACCAGGTGAAGGGTGGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGT 21660138 Query 33588 GCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACC 33647 ||| | || |||| || || ||||| || |||| ||||||||| ||| | || | || Sbjct 21660137 GCGACCATCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATGCC 21660078 Query 33648 TTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAA 33706 || ||||| ||||| | || | ||| || | |||||| || | || || || | Sbjct 21660077 CTCCTTGTCCTGGATTTT--GCTTGA-CATTCTCGATGGTGTCACTGGGCTCAACCTCCA 21660021 Query 33707 CCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 ||||| || || || || | || ||||||||||||||||| Sbjct 21660020 GGGTGATGGTCTTGCCAGTCAGGGTCTTTACAAAGATCTGCAT 21659978 Score = 98.7 bits (108), Expect = 7e-16 Identities = 161/228 (71%), Gaps = 3/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || || |||| ||| | ||||| || || ||| ||| || || |||||||| |||||| Sbjct 21660655 CCTCCCCTCAGACGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 21660596 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||| || || ||||| || |||| ||||||||| ||| | || Sbjct 21660595 AGGGTGCGACCATCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGG- 21660537 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | || || ||||| || || || |||| || | |||||| || | || || Sbjct 21660536 ATGCCCTCCTTGTCCTGGATCTTGGCCTTTGACATTCTCGATGGTGTCACTGGGCTCAAC 21660477 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 ||| ||||| || ||||| || | || || |||||||||||||| Sbjct 21660476 CTCAGG-GTGATGGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 21660430 Score = 96.9 bits (106), Expect = 2e-15 Identities = 162/229 (71%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || || |||| ||| | ||||| || || ||| ||| || || |||||||| |||||| Sbjct 21660428 CCTCCCCTCAGACGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAG 21660369 Query 33583 AGTGTGCGTTCGTCGT-CCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| | || | ||| ||||| ||||| || |||| ||||||||| ||| | || Sbjct 21660368 AGGGTGCGACCATCTTTCCAGCTGTTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGG 21660309 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||| | ||||| || || || | ||| || | |||||| || | || | Sbjct 21660308 GATGCCTCCCTTGTCCTGGATCTTGGCCTTGA-CATTCTCGATGGTGTCACTGGGCTCAA 21660250 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | ||| ||||| || ||||| || | || || |||||||||||||| Sbjct 21660249 CCTCAGG-GTGATGGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 21660202 Score = 96.9 bits (106), Expect = 2e-15 Identities = 161/229 (70%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTT-GTAATCGGA 33581 || || |||| ||| | ||||| || || ||| ||| || || ||||| ||| ||||| Sbjct 21660883 CCTCCCCTCAGACGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTTGTAGTCGGA 21660824 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 ||| ||||| | || |||| || || ||||| || |||| ||||||||| ||| | || Sbjct 21660823 GAGGGTGCGACCATCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGG 21660764 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | || || ||||| | | ||| || |||| || | |||||| || | || Sbjct 21660763 GATGCCCTCCTTGTCTGGATCTTTGCCTTG--ACATTCTCGATGGTGTCACTGGGCTCAC 21660706 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | ||||| || ||||| || | || || |||||||||||||| Sbjct 21660705 CCTCCAGGGTGATGGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 21660657 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328699917804480