Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq7 87.8 2e-12 seq14 82.4 7e-11 >seq7 Length=46052510 Score = 87.8 bits (96), Expect = 2e-12 Identities = 146/210 (70%), Gaps = 1/210 (0%) Strand=Plus/Minus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 |||| ||| | | | || ||||| || |||||||||||| | ||| || |||||| Sbjct 22020270 ACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCTTCC 22020211 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTAT-CGGT 132033 ||||| || |||| | |||| |||||||| || ||||| || ||||| || || | | | Sbjct 22020210 AGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGG 22020151 Query 132034 AATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTT 132093 || || |||| | || | || ||| | ||||| || |||| || | || || Sbjct 22020150 CATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCTCGACCTCGAGGGTGATGGTCTT 22020091 Query 132094 ACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || || || || | ||| |||||||| Sbjct 22020090 GCCTGTGAGGGTCTTCACGAAGATCTGCAT 22020061 Score = 87.8 bits (96), Expect = 2e-12 Identities = 137/195 (70%), Gaps = 1/195 (1%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 |||||||| || |||||||||||| | ||| || |||||| ||||| || ||| || Sbjct 22020482 GACTCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCTTCCAGCTGCTTGCCGCAA 22020423 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| |||||||| || ||||| || ||||| || || || || || |||| Sbjct 22020422 -AGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACA 22020364 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || ||| | ||||| || |||| || | || || || || || || || Sbjct 22020363 TTCTCAATGGTGTCGCTTGGCTCGACCTCGAGGGTGATGGTCTTGCCTGTGAGGGTCTTC 22020304 Query 132110 ATGAAAATCTGCATG 132124 | ||| ||||||||| Sbjct 22020303 ACGAAGATCTGCATG 22020289 >seq14 Length=34043612 Score = 82.4 bits (90), Expect = 7e-11 Identities = 135/194 (70%), Gaps = 2/194 (1%) Strand=Plus/Minus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || |||||||||||| | ||| || |||||| ||||| || |||| Sbjct 21660169 GACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCTTCCAGCTGCTTGCCGGCG 21660110 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| |||||||| || ||||| || ||||| || || || | ||||| || | Sbjct 21660109 AAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGA--TTTTGCTTGACA 21660052 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || || | ||||| || || | || | || || |||||||| || ||| Sbjct 21660051 TTCTCGATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTT 21659992 Query 132110 ATGAAAATCTGCAT 132123 | || |||||||| Sbjct 21659991 ACAAAGATCTGCAT 21659978 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476605129164840