Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq4 100 9e-18 seq809 98.7 3e-17 seq19 98.7 3e-17 seq17 98.7 3e-17 seq2 98.7 3e-17 >seq4 Length=26943076 Score = 100 bits (110), Expect = 9e-18 Identities = 70/80 (88%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 2761 TGTTTATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTG 2820 ||| || || ||| |||||||||||||||||| |||||||||||||||||||||||||| Sbjct 17139080 TGTATACCGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTG 17139021 Query 2821 GTTCAACCCCGGGCTTCAGC 2840 |||| | |||||| ||| || Sbjct 17139020 GTTCGATCCCGGGTTTCGGC 17139001 >seq809 Length=543156 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 426072 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 426131 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 426132 CCGGGTTTCGGC 426143 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 427832 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 427891 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 427892 CCGGGTTTCGGC 427903 >seq19 Length=39684913 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 9420296 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 9420355 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 9420356 CCGGGTTTCGGC 9420367 >seq17 Length=38925024 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 17606676 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 17606735 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 17606736 CCGGGTTTCGGC 17606747 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 26862243 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 26862184 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 26862183 CCGGGTTTCGGC 26862172 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 37396134 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 37396075 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 37396074 CCGGGTTTCGGC 37396063 Score = 95.1 bits (104), Expect = 4e-16 Identities = 66/74 (89%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 2767 TGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 |||| ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | Sbjct 37396631 TGGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGA 37396572 Query 2827 CCCCGGGCTTCAGC 2840 ||||| ||| || Sbjct 37396571 -TCCGGGTTTCGGC 37396559 >seq2 Length=36854581 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 8751927 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 8751868 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 8751867 CCGGGTTTCGGC 8751856 Score = 95.1 bits (104), Expect = 4e-16 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| ||||||||||||||| |||||||||||||| | | Sbjct 8751023 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTGAAGGTCCCTGGTTCGATC 8750964 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 8750963 CCGGGTTTCGGC 8750952 Score = 84.2 bits (92), Expect = 7e-13 Identities = 55/61 (90%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 2776 TAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACCCCGGGCT 2835 |||||||||||||||| | |||||||||||||||||||||||||||||| | ||||| | Sbjct 8750511 TAGCTCAGTTGGGAGAACGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATACCGGGTT 8750452 Query 2836 T 2836 | Sbjct 8750451 T 8750451 Score = 82.4 bits (90), Expect = 2e-12 Identities = 61/69 (88%), Gaps = 3/69 (4%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTT-GGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 || ||| |||||||||| ||||||| |||||||||||||||||||||||||||||| | Sbjct 8751421 GCCGAAATAGCTCAGTTTGGGAGAG--TTAGACTGAAGATCTAAAGGTCCCTGGTTCGAT 8751364 Query 2828 CCCGGGCTT 2836 |||||| || Sbjct 8751363 CCCGGGTTT 8751355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15849423351255