Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq14 114 1e-20 seq7 109 5e-19 >seq14 Length=34043612 Score = 114 bits (126), Expect = 1e-20 Identities = 141/192 (73%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| | ||| || | || ||||||||||| || || || Sbjct 21660167 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCTTCCAGCTGCTTGCCGGCGAA 21660108 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||| | || | || |||||||||| || |||||||| | | | Sbjct 21660107 GATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGA--TTTTGCTTGACATT 21660050 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || | || ||||||| ||||| || || || |||| || || || Sbjct 21660049 CTCGATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTTAC 21659990 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 21659989 AAAGATCTGCAT 21659978 Score = 107 bits (118), Expect = 2e-18 Identities = 141/193 (73%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTT-GTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAA 35603 |||||| || ||||| ||| |||| | ||| || | || ||||||||||| || || | Sbjct 21660848 CTCCTTCTGGATGTTTGTAGTCGGAGAGGGTGCGACCATCTTCCAGCTGCTTGCCGGCGA 21660789 Query 35604 ATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAG 35663 | |||| ||||||||||| | || | || |||||||| | ||||||| ||| | | Sbjct 21660788 AGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGT-CTGGATCTTTGCCTTGACAT 21660730 Query 35664 TTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 | | | ||||| || | || |||||| ||||| || ||||| |||| || |||| Sbjct 21660729 TCTCGATGGTGTCACTGGGCTCACCCTCCAGGGTGATGGTCTTACCAGTCAGGGTCTTCA 21660670 Query 35724 CAAATATCTGCAT 35736 |||| |||||||| Sbjct 21660669 CAAAGATCTGCAT 21660657 Score = 104 bits (114), Expect = 2e-17 Identities = 141/193 (73%), Gaps = 3/193 (2%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || |||||||| |||| | ||| || | || ||||||||||| || || || Sbjct 21660620 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCTTCCAGCTGCTTGCCGGCGAA 21660561 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGC-TTCAGAG 35663 |||| ||||||||||| | || | || |||||||||| |||||| | || | | Sbjct 21660560 GATCAGACGCTGCTGGTCTG-GGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTTGACAT 21660502 Query 35664 TTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 | | | ||||| || | || |||| || ||||| || ||||| |||| || |||| Sbjct 21660501 TCTCGATGGTGTCACTGGGCTCAACCT-CAGGGTGATGGTCTTACCAGTCAGGGTCTTCA 21660443 Query 35724 CAAATATCTGCAT 35736 |||| |||||||| Sbjct 21660442 CAAAGATCTGCAT 21660430 Score = 95.1 bits (104), Expect = 1e-14 Identities = 140/196 (71%), Gaps = 2/196 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGT-CCAGCTGCTTACCCGCAA 35603 |||||| || |||||||| |||| | ||| || | || | ||||||| || || || | Sbjct 21660393 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCTTTCCAGCTGTTTGCCGGCGA 21660334 Query 35604 ATATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAG 35663 | |||| ||||||||||| | || | || |||||||| |||||| ||| | | Sbjct 21660333 AGATCAGACGCTGCTGGTCTGGGGGGATGCCTCCCTTGTCCTGGATCTTGGCCTTGACAT 21660274 Query 35664 TTGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 | | | ||||| || | || |||| || ||||| || ||||| |||| || |||| Sbjct 21660273 TCTCGATGGTGTCACTGGGCTCAACCT-CAGGGTGATGGTCTTACCAGTCAGGGTCTTCA 21660215 Query 35724 CAAATATCTGCATTCT 35739 |||| |||||||| || Sbjct 21660214 CAAAGATCTGCATGCT 21660199 >seq7 Length=46052510 Score = 109 bits (120), Expect = 5e-19 Identities = 140/192 (73%), Gaps = 1/192 (1%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || || || |||||||| |||| | ||| || | || ||||||||||| || ||||| Sbjct 22020252 TCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAG 22020193 Query 35606 ATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATG-ATCTTTTGCTTCAGAGT 35664 |||| ||||||||||| | |||| || |||||||||| | ||||| ||||| | | Sbjct 22020192 ATCAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCCTGGCATCTTGGCCTTCACATT 22020133 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||||| | || ||||| | ||||| || || || || | || ||||| Sbjct 22020132 CTCAATGGTGTCGCTTGGCTCGACCTCGAGGGTGATGGTCTTGCCTGTGAGGGTCTTCAC 22020073 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 22020072 GAAGATCTGCAT 22020061 Score = 109 bits (120), Expect = 5e-19 Identities = 140/192 (73%), Gaps = 1/192 (1%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||| || || |||||||| |||| | ||| || | || ||||||||||| || ||||| Sbjct 22020480 CTCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCTTCCAGCTGCTTGCC-GCAAA 22020422 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||||||| | || | || |||||||||| |||||| ||||| | | Sbjct 22020421 GATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATT 22020362 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||||| | || ||||| | ||||| || || || || | || ||||| Sbjct 22020361 CTCAATGGTGTCGCTTGGCTCGACCTCGAGGGTGATGGTCTTGCCTGTGAGGGTCTTCAC 22020302 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 22020301 GAAGATCTGCAT 22020290 Score = 104 bits (114), Expect = 2e-17 Identities = 139/192 (72%), Gaps = 1/192 (1%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || || || |||||||| |||| |||| || | || ||||||||||| || ||||| Sbjct 22020708 TCTTTCTGGATGTTGTAGTCGGAAGAGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAG 22020649 Query 35606 ATCAACCGCTGCT-GGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| ||||||| |||| | || | || |||||||||| |||||| ||||| | | Sbjct 22020648 ATCAGACGCTGCTGGGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATT 22020589 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||||| | || ||||| | ||||| || || || || | || ||||| Sbjct 22020588 CTCAATGGTGTCGCTTGGCTCGACCTCGAGGGTGATGGTCTTGCCTGTGAGGGTCTTCAC 22020529 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 22020528 GAAGATCTGCAT 22020517 Score = 96.9 bits (106), Expect = 3e-15 Identities = 138/192 (72%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 35546 TCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAAT 35605 || || || |||||||| |||| | ||| || | || ||||||||||| || ||||| Sbjct 22020935 TCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAG 22020876 Query 35606 ATCAACCGCTGCTG-GTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 |||| |||||||| ||| | || | || |||||||||| |||||| ||||| | | Sbjct 22020875 ATCAGACGCTGCTGCGTCTGGGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATT 22020816 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | |||||||| | || ||||| | ||||| || || || || | | | |||| Sbjct 22020815 CTCAATGGTGTCGCTTGGCTCGACCTCGAGGGTGATGGTCTTGCCTGT-GAGGGTCTCAC 22020757 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 22020756 GAAGATCTGCAT 22020745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450787858016520