Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq7 86.0 8e-12 seq18 82.4 1e-10 seq10 82.4 1e-10 >seq7 Length=46052510 Score = 86.0 bits (94), Expect = 8e-12 Identities = 74/92 (80%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 110708 TAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAG 110767 |||||||| |||| || || |||| | |||| ||||| |||||||| || || |||||| Sbjct 17701902 TAGATGTTGCTTGTATAGGGCTCAATGGATTCGTTATTGCCCAAGATCTGGGCTGTGGAG 17701843 Query 110768 GCTGTTGGCATTGGTGCCATCAAAAGACTGTT 110799 ||||| ||||| || |||| || |||||||| Sbjct 17701842 GCTGTGGGCATAGGGGCCAGCAGCAGACTGTT 17701811 >seq18 Length=26030928 Score = 82.4 bits (90), Expect = 1e-10 Identities = 93/122 (76%), Gaps = 2/122 (2%) Strand=Plus/Plus Query 122678 CCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTTCT 122737 |||| |||| | ||| || ||||| |||||| || || |||||||| |||||||||| Sbjct 19431668 CCTCGTCTCTGCTAATGAGCTCATTGGAGAAGGTCAGGCCAGGCATGAGCCCCCGCTTCT 19431727 Query 122738 TCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 122796 ||| ||| |||| || ||| || || || |||||||| || ||||| ||| ||||| Sbjct 19431728 TCAGCCAGAAAATGGCAGCA-AAGGATCCAGAGAAGAAAATCCCCTCAACAGCAGCAAAA 19431786 Query 122797 GC 122798 || Sbjct 19431787 GC 19431788 >seq10 Length=26897606 Score = 82.4 bits (90), Expect = 1e-10 Identities = 94/124 (76%), Gaps = 2/124 (2%) Strand=Plus/Minus Query 122678 CCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTTCT 122737 ||||||||| | || || ||||| ||| || || || ||||| || || | ||| | Sbjct 26346948 CCTCATCTCTGCTGATGAGCTCATTGGAGTAGGTGAGTCCCGGCATCAGGCCTCTCTTTT 26346889 Query 122738 TCAACCAATAAATAGC-GCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAAC 122796 | |||||||| || || ||| |||||||| ||||||||||| |||||||| ||||| Sbjct 26346888 TTAACCAATAGATGGCAGCA-AATGACCCTGAGAAGAAGATTCCCTCCACTGCTGCAAAG 26346830 Query 122797 GCAA 122800 |||| Sbjct 26346829 GCAA 26346826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628024000442400