Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq18 111 2e-19 seq7 87.8 2e-12 >seq18 Length=26030928 Score = 111 bits (122), Expect = 2e-19 Identities = 105/134 (78%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 130035 CCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTCT 130094 ||||||| | | ||||| ||||| |||||| ||| || |||||||| |||||||||| Sbjct 19431668 CCTCGTCTCTGCTAATGAGCTCATTGGAGAAGGTCAGGCCAGGCATGAGCCCCCGCTTCT 19431727 Query 130095 TCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAACG 130154 ||| ||||||||| ||| ||| || ||||||||||| |||||||| ||| || || | Sbjct 19431728 TCAGCCAGAAAATGGCAGCAAAGGATCCAGAGAAGAAAATCCCCTCAACAGCAGCAAAAG 19431787 Query 130155 CAAAGAGACGCTCA 130168 | | | ||||||| Sbjct 19431788 CGACAACACGCTCA 19431801 >seq7 Length=46052510 Score = 87.8 bits (96), Expect = 2e-12 Identities = 75/93 (81%), Gaps = 0/93 (0%) Strand=Plus/Minus Query 118181 ATAGATATTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGA 118240 |||||| ||| | || || ||||||| | | || || || |||||||| ||||||||||| Sbjct 17701903 ATAGATGTTGCTTGTATAGGGCTCAATGGATTCGTTATTGCCCAAGATCTGGGCTGTGGA 17701844 Query 118241 GGCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 118273 |||||||||||| || |||| || || ||||| Sbjct 17701843 GGCTGTGGGCATAGGGGCCAGCAGCAGACTGTT 17701811 Score = 86.0 bits (94), Expect = 8e-12 Identities = 107/145 (74%), Gaps = 4/145 (3%) Strand=Plus/Minus Query 118752 GTGTACTCTATAATTTCCGTGCACAAGTT--TGAACTCTTAATGGTGCCCAAGTTCTTTT 118809 |||||||||| ||| || || || | ||| || ||| | |||||||||| ||||| | Sbjct 17698923 GTGTACTCTACAATCTCAGTACAGAGGTTACTGGACTTT--ATGGTGCCCAGGTTCTGCT 17698866 Query 118810 GATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTT 118869 | || ||| | || || |||||||| ||||||||||| || || || ||||| || | Sbjct 17698865 GGTTGCTCTTCCTATTGCAGGCATCCTTATAAAGCATGTAAGGGGTTCCGGTCTCAGTCT 17698806 Query 118870 GGGACTTGAGAATAGCCTTCCAGAC 118894 |||||| | ||| || | ||| || Sbjct 17698805 GGGACTCAATAATGGCGTGCCACAC 17698781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618427322681640