Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq18 100 3e-16 seq10 86.0 7e-12 seq7 82.4 8e-11 >seq18 Length=26030928 Score = 100 bits (110), Expect = 3e-16 Identities = 97/122 (80%), Gaps = 2/122 (2%) Strand=Plus/Minus Query 59991 GCTTTTGCATGC-GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCT 60049 |||||||| ||| || || || || ||||||||||| || || ||| ||||||||||| Sbjct 19431788 GCTTTTGC-TGCTGTTGAGGGGATTTTCTTCTCTGGATCCTTTGCTGCCATTTTCTGGCT 19431730 Query 60050 CAAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGA 60109 || ||||| || |||||||| ||||||| |||||||| ||||| ||| | | ||||| Sbjct 19431729 GAAGAAGCGGGGGCTCATGCCTGGCCTGACCTTCTCCAATGAGCTCATTAGCAGAGACGA 19431670 Query 60110 GG 60111 || Sbjct 19431669 GG 19431668 >seq10 Length=26897606 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 60345 AACCCTTTCGACTGGATGGAGACCATCTCGTTGGAAGGGAAGACCAACTTCTTTGAGAAG 60404 ||||| ||||||| |||||| ||||||| |||||||||| |||||||||||||||||| Sbjct 26348963 AACCCCTTCGACTTCATGGAGTCCATCTCCCTGGAAGGGAAAACCAACTTCTTTGAGAAG 26349022 Query 60405 CGGGTCGGGGATTAT 60419 || || | ||| ||| Sbjct 26349023 CGCGTGGCGGAATAT 26349037 >seq7 Length=46052510 Score = 82.4 bits (90), Expect = 8e-11 Identities = 105/145 (72%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 79126 GACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTTACAGGCGTCCTTGTAGCAC 79185 ||||| |||||||| | ||||| ||||||||||||| || ||||| ||||| || | Sbjct 17698890 GACTTTATGGTGCCCAGGTTCTGCTGGTTGCTCTTCCTATTGCAGGCATCCTTATAAAGC 17698831 Query 79186 ATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCCGTCCCAGATGTCCCGGGCC 79245 ||||| || || ||||||||| ||| || | || | ||| ||| | | | ||||| Sbjct 17698830 ATGTAAGGGGTTCCGGTCTCAGTCTGGGACTCAATAATGGCGTGCCACACCTGCTGGGCC 17698771 Query 79246 CGGACAACCTTCTTGTACCGACCCT 79270 || ||| |||| |||||||| Sbjct 17698770 TTCACTACCCGCTTGACCCGACCCT 17698746 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548517813165360