Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq10 96.9 4e-15 seq18 89.7 6e-13 >seq10 Length=26897606 Score = 96.9 bits (106), Expect = 4e-15 Identities = 97/126 (77%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 152028 CGTGAAGATGTATCGGGAGCTGGCCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTG 152087 |||||||||||| |||| |||||| || ||||||||||| | || || |||||||| Sbjct 13376091 CGTGAAGATGTAACGGGGGCTGGCAGCGTCCTTGCCACCGTTGATGCGGGTGCCAAACTG 13376150 Query 152088 TCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCAC 152147 || |||| |||| ||| | ||||||| |||||| || ||||| ||||| ||||| Sbjct 13376151 GCCCAGCGGCTGCAGGATGTTCACGTTGTTGCTGCCCACAAAGTTCTGGGCCAAGTTCAC 13376210 Query 152148 AATCGT 152153 ||||| Sbjct 13376211 GATCGT 13376216 Score = 95.1 bits (104), Expect = 1e-14 Identities = 96/125 (77%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 117305 GTGAAAATGTAACGAGAGCTTGCAGCATCCTTGCCACCAGCAAGACGCGTACCGAATTGT 117364 ||||| |||||||| | ||| ||||| ||||||||||| | || || || || || Sbjct 13376092 GTGAAGATGTAACGGGGGCTGGCAGCGTCCTTGCCACCGTTGATGCGGGTGCCAAACTGG 13376151 Query 117365 CCACTCGGCTCCAAGAGGTTCAGGTTGTTGGCGCCCACAAAGTTTTGAGCCAAGTTGACA 117424 || ||||| || || ||||| ||||||| |||||||||||| || |||||||| || Sbjct 13376152 CCCAGCGGCTGCAGGATGTTCACGTTGTTGCTGCCCACAAAGTTCTGGGCCAAGTTCACG 13376211 Query 117425 ATCGT 117429 ||||| Sbjct 13376212 ATCGT 13376216 >seq18 Length=26030928 Score = 89.7 bits (98), Expect = 6e-13 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 74772 TCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTC 74831 || |||||||| || | ||||| || || | ||||||||||| || || ||||||||| Sbjct 19431670 TCGTCTCTGCTAATGAGCTCATTGGAGAAGGTCAGGCCAGGCATGAGCCCCCGCTTCTTC 19431729 Query 74832 AACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCG 74891 | ||| || |||||| ||||| ||| |||||| || || || ||| ||||| ||| Sbjct 19431730 AGCCAGAAAATGGCAGCAAAGGATCCAGAGAAGAAAATCCCCTCAACAGCAGCAAAAGCG 19431789 Query 74892 ACAA 74895 |||| Sbjct 19431790 ACAA 19431793 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547209029836200