Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq14 100 2e-16 seq7 93.3 3e-14 >seq14 Length=34043612 Score = 100 bits (110), Expect = 2e-16 Identities = 164/231 (71%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTA-TAATCTG 34537 ||| || || ||||| | ||||| || || ||| |||||| || ||||| || || | Sbjct 21660884 GCCTCCCCTCAGACGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTTGTAGTCGG 21660825 Query 34538 AAAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCG 34597 | || || || | ||||| || || || ||||| || || | |||||| ||||| || | Sbjct 21660824 AGAGGGTGCGACCATCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGG 21660765 Query 34598 GCACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCC 34656 | | ||||||||||||| |||| |||| || || | || ||||| | ||| Sbjct 21660764 GGATGCCCTCCTTGTCTG-GATC-TTTGCCTTGACATTCTCGATGGTGTCACTGGGCTCA 21660707 Query 34657 ACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 | |||| ||| || || ||||| || | || |||||||| ||||||||| Sbjct 21660706 CCCTCCAGGGTGATGGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCATG 21660656 Score = 84.2 bits (92), Expect = 1e-11 Identities = 156/227 (69%), Gaps = 3/227 (1%) Strand=Plus/Minus Query 34486 CTAAGACGCAACACCAAATGGAGAGTGCT-CTCCTTTTGAATGTTATAATCTGAAAGTGT 34544 || ||||| | ||||| || || ||| |||||| || ||||| || || || || || Sbjct 21660197 CTCAGACGGAGCACCAGGTGAAGGGTGGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGT 21660138 Query 34545 TCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCC 34604 || | ||||| || || || ||||| || || | |||||| ||||| || || | || Sbjct 21660137 GCGACCATCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATGCC 21660078 Query 34605 CTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACTTCCAC 34664 ||||||||| || ||||| || | || ||||| | ||| || |||| Sbjct 21660077 CTCCTTGTCCTGGA--TTTTGCTTGACATTCTCGATGGTGTCACTGGGCTCAACCTCCAG 21660020 Query 34665 GGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTTGA 34711 ||| || || || || || | || || ||||| |||||||| |||| Sbjct 21660019 GGTGATGGTCTTGCCAGTCAGGGTCTTTACAAAGATCTGCATCTTGA 21659973 >seq7 Length=46052510 Score = 93.3 bits (102), Expect = 3e-14 Identities = 165/235 (70%), Gaps = 7/235 (3%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 |||||| || || || | ||||| ||| || ||| || || || ||||| || || || Sbjct 22020289 GCCGCCCCTGAGTCGGAGCACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGA 22020230 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 ||| || || | ||||| || || || |||||||| || | |||||| ||||| || || Sbjct 22020229 AAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTGGGGG 22020170 Query 34599 CACTCCCTCCTTGT-CTGTGATCTTTTGTTTTAACGAT-AAAATTGTGT--CTTCGCTCT 34654 | |||||||||| ||| ||| || | || || | ||| |||| ||| | || Sbjct 22020169 AATGCCCTCCTTGTCCTGGCATC-TTGGCCTTCACATTCTCAATGGTGTCGCTTGG--CT 22020113 Query 34655 CCACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709 | || || | ||| || || || || || | || ||||| || |||||||| || Sbjct 22020112 CGACCTCGAGGGTGATGGTCTTGCCTGTGAGGGTCTTCACGAAGATCTGCATCTT 22020058 Score = 87.8 bits (96), Expect = 1e-12 Identities = 162/232 (70%), Gaps = 7/232 (3%) Strand=Plus/Minus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 |||||| || || || | ||||| || || ||| ||| || || ||||| || || || Sbjct 22020516 GCCGCCCCTGAGTCGGAGCACCAGGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCGGA 22020457 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 ||| || || | ||||| || || || ||| |||| || | |||||| ||||| || || Sbjct 22020456 AAGGGTGCGGCCATCTTCCAGCTGCTTGCCG-CAAAGATCAGACGCTGCTGGTCTGGGGG 22020398 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGT--CTTCGCTCTC 34655 | ||||||||||| |||| || | || || | ||| |||| ||| | ||| Sbjct 22020397 GATGCCCTCCTTGTCCTGGATC-TTGGCCTTCACATTCTCAATGGTGTCGCTTGG--CTC 22020341 Query 34656 CACTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || || | ||| || || || || || | || ||||| || ||||||||| Sbjct 22020340 GACCTCGAGGGTGATGGTCTTGCCTGTGAGGGTCTTCACGAAGATCTGCATG 22020289 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314725691353427