Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq21 131 2e-25 >seq21 Length=24691485 Score = 131 bits (144), Expect = 2e-25 Identities = 119/150 (79%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 34577 ATGGCGCTCCCCCCGTGCCACACCCTCTGCCAATTCTACGTCGCGAATGGGGAGCTGTCC 34636 ||||| || || |||||||| || | ||||| ||||||||| | ||||||||||| Sbjct 495216 ATGGCTCTGCCACCGTGCCATGCCTTGTGCCAGTTCTACGTCATCGACGGGGAGCTGTCA 495275 Query 34637 TGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGT 34696 ||||| || || ||||| || || |||||||| | || ||||| ||||||||||| || Sbjct 495276 TGCCAACTGTACCAACGCTCCGGGGACATGGGCCTGGGTGTGCCCTTCAACATTGCAAGC 495335 Query 34697 TACGCTCTGCTCACGTACATGATCGCTCAT 34726 ||||| || ||||| ||||||||||| ||| Sbjct 495336 TACGCCCTCCTCACCTACATGATCGCCCAT 495365 Score = 131 bits (144), Expect = 2e-25 Identities = 119/150 (79%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 6619 ATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCC 6678 ||| ||||||||||| ||||| || ||||| || ||||||||||| ||||| || | || Sbjct 495365 ATGGGCGATCATGTAGGTGAGGAGGGCGTAGCTTGCAATGTTGAAGGGCACACCCAGGCC 495306 Query 6679 CATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCGACGTAGAATTG 6738 |||||| || || ||||| || || ||||| ||||||||||| | ||||||||| || Sbjct 495305 CATGTCCCCGGAGCGTTGGTACAGTTGGCATGACAGCTCCCCGTCGATGACGTAGAACTG 495246 Query 6739 GCAGAGGGTGTGGCACGGGGGGAGCGCCAT 6768 ||| | || |||||||| || || ||||| Sbjct 495245 GCACAAGGCATGGCACGGTGGCAGAGCCAT 495216 Score = 98.7 bits (108), Expect = 9e-16 Identities = 113/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 34295 ACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGGGTCTCGA 34354 || ||| | ||||||||||| || || ||||| ||||| || | ||||| ||| Sbjct 494589 ACAAACGCAAAGGAGCTCTCTGAGAAAGGTGTAAAGATTTGGGATGCAAATGGGTCACGA 494648 Query 34355 GACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACTTGGGCCCGGTCTAC 34414 || || ||||||||| ||| ||| || ||||||||| || ||| |||| || || || Sbjct 494649 GATTTCCTGGACAAGATGGGCTTCACAGATCGGGAGGAAGGGGACCTGGGGCCTGTATAT 494708 Query 34415 GGGTTCCAGTGGAGACACTTTGGGGCGGAGTA 34446 || ||||||||| | ||||| || || ||||| Sbjct 494709 GGTTTCCAGTGGCGGCACTTCGGTGCTGAGTA 494740 Score = 98.7 bits (108), Expect = 9e-16 Identities = 113/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958 ||||| || || ||||| | ||||||||| || || || || |||| ||| || |||||| Sbjct 494740 TACTCAGCACCGAAGTGCCGCCACTGGAAACCATATACAGGCCCCAGGTCCCCTTCCTCC 494681 Query 6959 CGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTC 7018 ||| || ||| ||| ||||||||| || ||||| ||||| | || ||||| ||||| Sbjct 494680 CGATCTGTGAAGCCCATCTTGTCCAGGAAATCTCGTGACCCATTTGCATCCCAAATCTTT 494621 Query 7019 ACCCCCCGGGACGAGAGCTCCTTGGTGTTCGT 7050 || || ||||||||||| | ||| || Sbjct 494620 ACACCTTTCTCAGAGAGCTCCTTTGCGTTTGT 494589 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448256690257680