Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq14 176 1e-38 seq7 176 1e-38 >seq14 Length=34043612 Score = 176 bits (194), Expect = 1e-38 Identities = 170/216 (79%), Gaps = 3/216 (1%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGG-ACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATC 210961 || || |||||||| |||| |||| || |||||||| || || | ||||| | ||||| Sbjct 21660188 AGCACCAGGTGAAGGGTGGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATC 21660129 Query 210962 TTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021 ||||||||||||||| |||||||| || || || ||||| || || | || |||||||| Sbjct 21660128 TTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTC 21660069 Query 211022 CTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGT 211081 ||||| ||||| || || || |||||||||||| | |||||||| || ||||| || Sbjct 21660068 CTGGA--TTTTGCTTGACATTCTCGATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGT 21660011 Query 211082 CTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||| || || || ||||||||||| | |||||| || Sbjct 21660010 CTTGCCAGTCAGGGTCTTTACAAAGATCTGCATCTT 21659975 Score = 167 bits (184), Expect = 5e-36 Identities = 167/213 (78%), Gaps = 3/213 (1%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || |||||||| |||||||| || |||||||| || || | ||||| | |||||| Sbjct 21660640 AGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCT 21660581 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||||||||| |||||||| || || || ||||| || || | || ||||||||| Sbjct 21660580 TCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGG-GGGATGCCCTCCTTGTCC 21660522 Query 211023 TGGATCTT-TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGT 211081 |||||||| ||| || || |||||||||||| | |||||||| || ||||| || Sbjct 21660521 TGGATCTTGGCCTTTGACATTCTCGATGGTGTCACTGGGCTCAACCTC-AGGGTGATGGT 21660463 Query 211082 CTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||| || || || ||||| ||||| | |||||| Sbjct 21660462 CTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 21660430 Score = 161 bits (178), Expect = 2e-34 Identities = 165/213 (77%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || |||||||| |||||||| || |||||||| || || | ||||| | |||||| Sbjct 21660413 AGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCT 21660354 Query 210963 T-CCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021 | ||||||| ||||| |||||||| || || || ||||| || || | ||| ||||||| Sbjct 21660353 TTCCAGCTGTTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATGCCTCCCTTGTC 21660294 Query 211022 CTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGT 211081 ||||||||| || || || |||||||||||| | |||||||| || ||||| || Sbjct 21660293 CTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCTCAACCTC-AGGGTGATGGT 21660235 Query 211082 CTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||| || || || ||||| ||||| | |||||| Sbjct 21660234 CTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 21660202 Score = 161 bits (178), Expect = 2e-34 Identities = 165/213 (77%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTA-TAATCCGCAAGGGTCCTTCCATC 210961 || || |||||||| |||||||| || |||||||| || || | ||||| | ||||| Sbjct 21660868 AGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTTGTAGTCGGAGAGGGTGCGACCATC 21660809 Query 210962 TTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTC 211021 ||||||||||||||| |||||||| || || || ||||| || || | || ||||||| Sbjct 21660808 TTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGT- 21660750 Query 211022 CTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGT 211081 |||||||||| || || || |||||||||||| | ||| |||| || ||||| || Sbjct 21660749 CTGGATCTTTGCCTTGACATTCTCGATGGTGTCACTGGGCTCACCCTCCAGGGTGATGGT 21660690 Query 211082 CTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||| || || || ||||| ||||| | |||||| Sbjct 21660689 CTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 21660657 Score = 116 bits (128), Expect = 9e-21 Identities = 159/215 (74%), Gaps = 8/215 (4%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || |||||||| |||||||| || |||||||| || || | ||||| | |||||| Sbjct 21661094 AGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCT 21661035 Query 210963 TCCA-GCTGCTTGCCTGCGAAGATAAGGCGTTGTT--GGTCAGGAGGAACTCCTTCCTTG 211019 ||| |||| |||| |||||||| || || || | |||| || ||| ||| ||||| Sbjct 21661034 TCCCCGCTG-TTGCG-GCGAAGATCAGACGCTGCTTGGGTCTGGGGGATG-CCTCCCTTG 21660978 Query 211020 TCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATC 211079 ||||||||| | | | || || ||||||||| | |||||||| || ||||| Sbjct 21660977 TCCTGGATC--TGCCTGGAACTTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATG 21660920 Query 211080 GTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || || ||||| ||||| | |||||| Sbjct 21660919 GTCTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 21660885 >seq7 Length=46052510 Score = 176 bits (194), Expect = 1e-38 Identities = 173/221 (78%), Gaps = 7/221 (3%) Strand=Plus/Minus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 |||| || || |||||||| ||||||||||| |||||||| || || | |||||| | Sbjct 22020506 AGTCGGAGCACCAGGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGG 22020447 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 |||||||||||||||||||| || ||||| || || || ||||| || || | || ||| Sbjct 22020446 CCATCTTCCAGCTGCTTGCC-GCAAAGATCAGACGCTGCTGGTCTGGGGGGATGCCCTCC 22020388 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTT---TCAACCTCGAGA 211073 |||||||||||||| ||||| || || |||||||| |||| || |||||||| Sbjct 22020387 TTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTC---GCTTGGCTCGACCTCGAGG 22020331 Query 211074 GTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| || ||||| ||||| || || | |||||| Sbjct 22020330 GTGATGGTCTTGCCTGTGAGGGTCTTCACGAAGATCTGCAT 22020290 Score = 168 bits (186), Expect = 2e-36 Identities = 174/225 (77%), Gaps = 7/225 (3%) Strand=Plus/Minus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 |||| || || || ||||| ||||| ||||| |||||||| || || | |||||| | Sbjct 22020279 AGTCGGAGCACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGG 22020220 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 |||||||||||||||||||| || ||||| || || || ||||| || |||| || ||| Sbjct 22020219 CCATCTTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTGGGGGAATGCCCTCC 22020160 Query 211017 TTGTCCTGG-ATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTT---TCAACCTCGAG 211072 ||||||||| ||||| ||||| || || |||||||| |||| || |||||||| Sbjct 22020159 TTGTCCTGGCATCTTGGCCTTCACATTCTCAATGGTGTC---GCTTGGCTCGACCTCGAG 22020103 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||||| ||||| || ||||| ||||| || || | |||||| || Sbjct 22020102 GGTGATGGTCTTGCCTGTGAGGGTCTTCACGAAGATCTGCATCTT 22020058 Score = 156 bits (172), Expect = 1e-32 Identities = 170/222 (77%), Gaps = 8/222 (4%) Strand=Plus/Minus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 |||| || || || ||||| ||||| ||||| |||||||| || || | |||||| | Sbjct 22020962 AGTCGGAGCACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGG 22020903 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTG-GTCAGGAGGAACTCCTTC 211015 |||||||||||||||||||| || ||||| || || || || ||| || || | || || Sbjct 22020902 CCATCTTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGCGTCTGGGGGGATGCCCTC 22020843 Query 211016 CTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTT---TCAACCTCGAG 211072 ||||||||||||||| ||||| || || |||||||| |||| || |||||||| Sbjct 22020842 CTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTC---GCTTGGCTCGACCTCGAG 22020786 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| || ||||| ||| | || || | |||||| Sbjct 22020785 GGTGATGGTCTTGCCTGTGAGGGTC-TCACGAAGATCTGCAT 22020745 Score = 147 bits (162), Expect = 5e-30 Identities = 168/222 (76%), Gaps = 8/222 (4%) Strand=Plus/Minus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 |||| || || || ||| | ||||| ||||| |||||||| || || | | ||| | Sbjct 22020734 AGTCGGAGCACCAGATGAGG-GTGGATTCTTTCTGGATGTTGTAGTCGGAAGAGGTGCGG 22020676 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGG-TCAGGAGGAACTCCTTC 211015 |||||||||||||||||||| || ||||| || || || ||| || || || | || || Sbjct 22020675 CCATCTTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGGTCTGGGGGGATGCCCTC 22020616 Query 211016 CTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTT---TCAACCTCGAG 211072 ||||||||||||||| ||||| || || |||||||| |||| || |||||||| Sbjct 22020615 CTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTC---GCTTGGCTCGACCTCGAG 22020559 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| || ||||| ||||| || || | |||||| Sbjct 22020558 GGTGATGGTCTTGCCTGTGAGGGTCTTCACGAAGATCTGCAT 22020517 Score = 132 bits (146), Expect = 1e-25 Identities = 167/223 (75%), Gaps = 10/223 (4%) Strand=Plus/Minus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 |||| || || || ||||| ||||| ||||| |||||||| || || | |||||| | Sbjct 22021190 AGTCGGAGCACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTCGGAAAGGGTGCGG 22021131 Query 210957 -CCATCTTCCAGCTGCTTGCCTGCGAA-GATAAGGCGTTGTTGGTCAGGAGGAACTCCTT 211014 |||||||| ||||||||||| || || ||| || || || || || |||| || | Sbjct 22021130 GCCATCTTC-AGCTGCTTGCCGGCCAAAGATCAGACGCTGCTGTCTGGGGGGAATGCCCT 22021072 Query 211015 CCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTT---TCAACCTCGA 211071 |||||||||||||||| ||||| || || |||||||| |||| || ||||||| Sbjct 22021071 CCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTC---GCTTGGCTCGACCTCGA 22021015 Query 211072 GAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 | ||||| ||| | || ||||| ||||| || || | |||||| Sbjct 22021014 GGGTGATGGTC-TGCCTGTGAGGGTCTTCACGAAGATCTGCAT 22020973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159136866183935