Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Esox_20lucius_20[refseq_20GCF_5F000721915.3_202017-01-18] 1,019 sequences; 904,497,253 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq14 102 7e-17 seq7 98.7 9e-16 >seq14 Length=34043612 Score = 102 bits (112), Expect = 7e-17 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 39093 CTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAA 39152 ||| || || || || || |||| || || || | || || ||||| ||||| || || Sbjct 21660167 CTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGACCATCTTCCAGCTGCTTGCCGGCGAA 21660108 Query 39153 TATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGT 39212 || |||||||||||||| | ||| | || ||| |||||| ||||| || |||| | Sbjct 21660107 GATCAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGGATTT--TGCTTGACATT 21660050 Query 39213 CGCCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAAC 39272 | | | || || || | ||| || |||| ||||| | || || ||||| || || || Sbjct 21660049 CTCGATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTGCCAGTCAGGGTCTTTAC 21659990 Query 39273 AAAGATTTGCATCTTTAC 39290 |||||| |||||||| || Sbjct 21659989 AAAGATCTGCATCTTGAC 21659972 Score = 87.8 bits (96), Expect = 2e-12 Identities = 161/232 (69%), Gaps = 3/232 (1%) Strand=Plus/Minus Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113 || |||||| || | || | ||||| || || ||| ||| || || || || || || Sbjct 21660659 CATGCCTCCCCTCAGACGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTC 21660600 Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGT 39173 || || || || | || || ||||| ||||| || || || |||||||||||||| | Sbjct 21660599 GGAGAGGGTGCGACCATCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTG- 21660541 Query 39174 GGGCACGCTCTCTTTGTCCATGAT-TTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACT 39232 ||| | || ||| |||||| ||| || ||||| || | | || || || | || Sbjct 21660540 GGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTTGACATTCTCGATGGTGTCACTGGGCT 21660481 Query 39233 CCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | || | || ||||| | || || ||||| || || |||||||| ||||| Sbjct 21660480 CAACCT-CAGGGTGATGGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 21660430 Score = 82.4 bits (90), Expect = 7e-11 Identities = 159/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113 || |||||| || | || | ||||| || || ||| ||| || || || || || || Sbjct 21660432 CATGCCTCCCCTCAGACGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTC 21660373 Query 39114 GGCAAGTGTTCGTTCGTCAT-CAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGG 39172 || || || || | || | | ||||||||||| || || || |||||||||||||| | Sbjct 21660372 GGAGAGGGTGCGACCATCTTTCCAGCTGTTTGCCGGCGAAGATCAGACGCTGCTGGTCTG 21660313 Query 39173 TGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACT 39232 ||| | || | |||||| ||| || |||| || | | || || || | || Sbjct 21660312 GGGGGATGCCTCCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCACTGGGCT 21660253 Query 39233 CCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | || | || ||||| | || || ||||| || || |||||||| ||||| Sbjct 21660252 CAACCT-CAGGGTGATGGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 21660202 Score = 82.4 bits (90), Expect = 7e-11 Identities = 159/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTA-TAAT 39112 || |||||| || | || | ||||| || || ||| ||| || || || || || | Sbjct 21660887 CATGCCTCCCCTCAGACGGAGCACCAGGTGAAGGGTGGACTCCTTCTGGATGTTTGTAGT 21660828 Query 39113 CGGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGG 39172 ||| || || || | || || ||||| ||||| || || || |||||||||||||| | Sbjct 21660827 CGGAGAGGGTGCGACCATCTTCCAGCTGCTTGCCGGCGAAGATCAGACGCTGCTGGTCTG 21660768 Query 39173 TGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACT 39232 ||| | || ||| |||| | ||| || |||| || | | || || || | || Sbjct 21660767 GGGGGATGCCCTCCTTGT-CTGGATCTTTGCCTTGACATTCTCGATGGTGTCACTGGGCT 21660709 Query 39233 CCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | | |||| ||||| | || || ||||| || || |||||||| ||||| Sbjct 21660708 CACCCTCCAGGGTGATGGTCTTACCAGTCAGGGTCTTCACAAAGATCTGCAT 21660657 >seq7 Length=46052510 Score = 98.7 bits (108), Expect = 9e-16 Identities = 164/236 (69%), Gaps = 1/236 (0%) Strand=Plus/Minus Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113 || ||| || || | || | ||||| ||| || ||| ||||| || || || || || Sbjct 22020292 CATGCCGCCCCTGAGTCGGAGCACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTC 22020233 Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGT 39173 || ||| || || | || || ||||| ||||| ||||| || |||||||||||||| | Sbjct 22020232 GGAAAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGGTCTGG 22020173 Query 39174 GGGCACGCTCTCTTTGTCCATG-ATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACT 39232 ||| | || ||| |||||| | || || || | || | | || ||||| | || Sbjct 22020172 GGGAATGCCCTCCTTGTCCTGGCATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCT 22020113 Query 39233 CCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCTTT 39288 | || || | ||||| | || || || || || || || ||||| ||||||||| Sbjct 22020112 CGACCTCGAGGGTGATGGTCTTGCCTGTGAGGGTCTTCACGAAGATCTGCATCTTT 22020057 Score = 93.3 bits (102), Expect = 4e-14 Identities = 160/231 (69%), Gaps = 1/231 (0%) Strand=Plus/Minus Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113 || ||| || || | || | ||||| || || ||| |||||| || || || || || Sbjct 22020519 CATGCCGCCCCTGAGTCGGAGCACCAGGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTC 22020460 Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGT 39173 || ||| || || | || || ||||| ||||| ||||| || |||||||||||||| | Sbjct 22020459 GGAAAGGGTGCGGCCATCTTCCAGCTGCTTGCC-GCAAAGATCAGACGCTGCTGGTCTGG 22020401 Query 39174 GGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTC 39233 ||| | || ||| |||||| ||| || || | || | | || ||||| | ||| Sbjct 22020400 GGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCTC 22020341 Query 39234 CACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 || || | ||||| | || || || || || || || ||||| ||||| Sbjct 22020340 GACCTCGAGGGTGATGGTCTTGCCTGTGAGGGTCTTCACGAAGATCTGCAT 22020290 Score = 82.4 bits (90), Expect = 7e-11 Identities = 159/232 (69%), Gaps = 2/232 (1%) Strand=Plus/Minus Query 39054 CAAGCCTCCTCTTAAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATC 39113 || ||| || || | || | ||||| ||| || ||| ||||| || || || || || Sbjct 22020975 CATGCCGCCCCTGAGTCGGAGCACCAGATGAAGGGTGGATTCTTTCTGGATGTTGTAGTC 22020916 Query 39114 GGCAAGTGTTCGTTCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTG-GTCGG 39172 || ||| || || | || || ||||| ||||| ||||| || ||||||||||| ||| | Sbjct 22020915 GGAAAGGGTGCGGCCATCTTCCAGCTGCTTGCCGGCAAAGATCAGACGCTGCTGCGTCTG 22020856 Query 39173 TGGGCACGCTCTCTTTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACT 39232 ||| | || ||| |||||| ||| || || | || | | || ||||| | || Sbjct 22020855 GGGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACATTCTCAATGGTGTCGCTTGGCT 22020796 Query 39233 CCACGTCCACCGTGATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | || || | ||||| | || || || || | | | || ||||| ||||| Sbjct 22020795 CGACCTCGAGGGTGATGGTCTTGCCTGTGAG-GGTCTCACGAAGATCTGCAT 22020745 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429540265446347